KEGG   Variovorax paradoxus B4: VAPA_2c08950
Entry
VAPA_2c08950      CDS       T02835                                 
Name
(GenBank) putative lipid A 3-O-deacylase
  KO
K12976  lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
vpd  Variovorax paradoxus B4
Pathway
vpd00540  Lipopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    VAPA_2c08950
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:vpd01005]
    VAPA_2c08950
Lipopolysaccharide biosynthesis proteins [BR:vpd01005]
 Lipid A
  VAPA_2c08950
SSDB
Motif
Pfam: PagL TCL1_MTCP1
Other DBs
NCBI-ProteinID: AGU53451
UniProt: T1XLM9
LinkDB
Position
2:920006..920611
AA seq 201 aa
MSDRTFRFNLRLPQLRRRRHGAAMVLLGIVACISQVARADTPLHPPSSLFTQFGSAHGTR
TLTAGLTWDLPYRWQLGPGELSSYLEASYAYWQIQSMDRVGLSHLSQLALIPVLRYRPAD
GASPWFFETGLGVTATSSVYRTRQKSFSTSFNFGTHLAVGRNFGAQRQHEIALRLEHFSN
AGIKHPNPGENFVQIRYARRF
NT seq 606 nt   +upstreamnt  +downstreamnt
atgtccgatcgaactttccgcttcaacctccggctgccgcaactccgccgccggcgacat
ggcgcggcaatggtccttctcggcatcgtcgcctgcatctcgcaggtggcgcgcgccgac
acgccgttgcaccccccctcttccctcttcactcagttcggctcggcgcacggaacccgc
acgctgaccgcgggactgacctgggacctgccttaccgttggcaactgggcccaggcgag
ctgagcagctatctggaagcctcctacgcgtactggcagatccagtcgatggaccgggtg
gggctttcgcacctgtcgcagctcgcgttgattccagtgttgcgctatcgccccgcggat
ggggcgtcgccgtggttttttgaaaccgggctgggggtgactgccacctcgtcggtctac
aggacccggcagaagagcttttcgacgagcttcaacttcggcacccacctggcggtcggc
cgcaacttcggtgcgcaacgccagcacgagatcgcgttgcgcctcgagcatttttcgaat
gcgggcatcaagcacccgaaccccggcgagaatttcgtccagatccgatacgcacgcagg
ttctag

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