Variovorax paradoxus B4: VAPA_2c08950
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Entry
VAPA_2c08950 CDS
T02835
Name
(GenBank) putative lipid A 3-O-deacylase
KO
K12976
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00540
Lipopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VAPA_2c08950
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vpd01005
]
VAPA_2c08950
Lipopolysaccharide biosynthesis proteins [BR:
vpd01005
]
Lipid A
VAPA_2c08950
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GFIT
Motif
Pfam:
PagL
TCL1_MTCP1
Motif
Other DBs
NCBI-ProteinID:
AGU53451
UniProt:
T1XLM9
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All DBs
Position
2:920006..920611
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AA seq
201 aa
AA seq
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MSDRTFRFNLRLPQLRRRRHGAAMVLLGIVACISQVARADTPLHPPSSLFTQFGSAHGTR
TLTAGLTWDLPYRWQLGPGELSSYLEASYAYWQIQSMDRVGLSHLSQLALIPVLRYRPAD
GASPWFFETGLGVTATSSVYRTRQKSFSTSFNFGTHLAVGRNFGAQRQHEIALRLEHFSN
AGIKHPNPGENFVQIRYARRF
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcgaactttccgcttcaacctccggctgccgcaactccgccgccggcgacat
ggcgcggcaatggtccttctcggcatcgtcgcctgcatctcgcaggtggcgcgcgccgac
acgccgttgcaccccccctcttccctcttcactcagttcggctcggcgcacggaacccgc
acgctgaccgcgggactgacctgggacctgccttaccgttggcaactgggcccaggcgag
ctgagcagctatctggaagcctcctacgcgtactggcagatccagtcgatggaccgggtg
gggctttcgcacctgtcgcagctcgcgttgattccagtgttgcgctatcgccccgcggat
ggggcgtcgccgtggttttttgaaaccgggctgggggtgactgccacctcgtcggtctac
aggacccggcagaagagcttttcgacgagcttcaacttcggcacccacctggcggtcggc
cgcaacttcggtgcgcaacgccagcacgagatcgcgttgcgcctcgagcatttttcgaat
gcgggcatcaagcacccgaaccccggcgagaatttcgtccagatccgatacgcacgcagg
ttctag
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