Variovorax paradoxus B4: VAPA_2c08960
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Entry
VAPA_2c08960 CDS
T02835
Name
(GenBank) transcriptional regulator, AraC family
KO
K25495
AraC family transcriptional regulator, regulator of nimT
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_2c08960
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
AraC family
VAPA_2c08960
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Cupin_2
AraC_binding
Motif
Other DBs
NCBI-ProteinID:
AGU53452
UniProt:
T1XKN3
LinkDB
All DBs
Position
2:complement(920608..921486)
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AA seq
292 aa
AA seq
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MRDATDESTDDARIRMPAGRLNMSKSGQDEPWGMRRQDPWTFEFDKMKARVAAVRIRTQA
FTEELPVHQHPQGQLAMVLRGTVTCEVPGALWMAPLHGGFWIPGGVPHSLRVSADGNVCF
LFVEDAAAAMPKTCCALSISPLLRELILHLAALPEGAQREPQALRLHAVLLDQLVRMPTE
AMHLPVSDEPRLRRLIDALMRDPADRTTAAQWASRLAMSERTLTRLVQLEMGMSFGRWSQ
RLRLIVALQSLTSGLPVQQVAHDLGYDSVSAFIAMFRKAMGQPPARYLARRR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcgggatgccaccgatgaatctactgacgatgcgcggattcgaatgcctgcgggccga
ctgaatatgagcaaatccggtcaagatgaaccgtggggcatgcgccgccaagacccctgg
actttcgagtttgacaagatgaaggcccgcgtggccgccgtgcggatccgcacccaggcg
ttcacggaggaattgccggtgcatcagcatccgcaggggcagctggcaatggtgttgcgc
ggcacggtgacgtgtgaagtgccgggtgcgctgtggatggcgccgctgcacggcggcttc
tggattcccggaggcgtgccccacagcctccgtgtctcggcggacgggaatgtctgcttt
ctttttgtggaagacgccgccgcagccatgccgaagacctgctgtgcgttgagcatcagc
cccttgctgcgcgagctcattcttcacctggccgccttgccagaaggcgcgcagcgcgag
ccgcaggcgctgcggctgcatgccgtgctgctggaccaactggtgcgcatgccaaccgag
gccatgcaccttccggtgtcggacgagccgcgcctgcgccgcctgatcgatgcgctgatg
cgcgatccggcggaccgcaccaccgcagcgcagtgggcctcgcgcctggccatgagcgag
cggaccctgacccgcctcgtgcagctcgaaatgggcatgtccttcggccgctggagccag
cgcctgcgcctgatcgtggcgctgcagtcgttgacgtccggcctcccggtgcagcaggtg
gcccatgacctgggctatgactcggtgagtgccttcatcgccatgttcaggaaagccatg
ggccagccgcccgcgcgttatcttgcgcggcgccgctag
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