Variovorax paradoxus B4: VAPA_2c09390
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Entry
VAPA_2c09390 CDS
T02835
Name
(GenBank) putative efflux transporter, RND family
KO
K18901
membrane fusion protein, multidrug efflux system
Organism
vpd
Variovorax paradoxus B4
Module
vpd_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_2c09390
01504 Antimicrobial resistance genes [BR:
vpd01504
]
VAPA_2c09390
Transporters [BR:
vpd02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
VAPA_2c09390
Antimicrobial resistance genes [BR:
vpd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
VAPA_2c09390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
Biotin_lipoyl_2
HlyD_D23
CusB_dom_1
DUF3910
Diguanyl_cycl_sensor
SpuA_C
VWA_3_C
Motif
Other DBs
NCBI-ProteinID:
AGU53495
UniProt:
T1XMZ6
LinkDB
All DBs
Position
2:960039..961214
Genome browser
AA seq
391 aa
AA seq
DB search
MKTLKKQHLAVVTTAVAVVVAGSMFWKHGSEAHPQAAAALPIVKYRPALQRSVSDAQDYT
GRLEAVDLVDVRAKVPGSLLAVHFKPGQHVRQGDVLFVIDPAPFETQVRQAQATLAGAEA
RQRLADTERARGQRLLESNSIARREFDTLDNAAREAASSLKGAQAALAQAQLQLSYTQVR
APIAGRISRAEITAGNVVTAGGEATPLTRIVSDSKLYASFNVDEQSYLQIIAPSLRAGTQ
PVVKVGLATDTDFPYAASIEAIDNQMDTRSGTVRVRARIDKVNPEMLPGLRARIRLQGGA
PYDAVLVDEAVVSTDQDRKYVLVVNAQNKVERRVVDLGVLQGTQRVVRSGLAPGAKVIVD
GAFRASPGASVSAVAAEAPEASAGATNGGRS
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccctcaagaagcagcacctggcggtcgtcacgactgccgttgcggtggtcgtt
gctggcagcatgttttggaagcacggttccgaagcgcatcctcaagccgccgccgcactc
cccatcgtcaagtaccggccagccttgcagcgctcggtgtccgatgcgcaggactacacg
gggcggctcgaagccgtggacctcgtcgacgttcgcgccaaggtaccgggctcgctgctc
gcggtgcacttcaagccgggccagcatgttcgccagggtgacgttcttttcgtcatcgac
ccagcacccttcgagacccaggtgcgccaggcgcaggccaccctggcaggtgccgaagca
cggcaacggctggcagacacggagcgcgcccgcggacagaggctgctggaatcgaattcg
atcgcgcgcagggagttcgacacgctcgacaatgcggcgcgcgaggctgcctcgtcactg
aagggagcgcaggccgctctcgcgcaggctcaactgcagctcagctacacccaggttcgc
gcgcctattgcgggacggatctcccgggcggaaatcacggcgggcaatgtggtgacggca
ggcggggaagcgaccccgctcaccaggatcgtctctgacagcaagctctacgcatccttc
aacgtggacgagcagagctacctccagatcatcgccccttcgctgagggcgggcacgcag
cctgtagtgaaggtcggtttggccaccgacaccgactttccctacgcggcgtccatcgaa
gcgatcgacaaccagatggatacccggtcgggaaccgtgcgggttcgtgcgcgcatcgac
aaggtgaatcccgagatgcttcccggtcttcgggcgcgcatccgtctgcaaggcggtgcc
ccctatgacgccgtgttggtggacgaggccgtcgtcagcaccgaccaggaccggaagtat
gttctcgtcgtcaatgcgcagaacaaggtcgagcgccgggtcgtcgacctcggcgtgctg
caaggaacgcagcgggtcgtgcgcagcgggctcgccccgggtgccaaggtcattgtggat
ggcgctttccgcgcgtcccccggtgcgtcggtgtccgcagtcgctgcagaggccccggag
gcctccgccggcgccaccaacggaggcaggtcgtga
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