Variovorax paradoxus B4: VAPA_2c10520
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Entry
VAPA_2c10520 CDS
T02835
Name
(GenBank) transcriptional regulator, AraC family
KO
K07506
AraC family transcriptional regulator
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_2c10520
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
AraC family
VAPA_2c10520
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_AsnC-type
HTH_23
HTH_24
CYNS_N
Motif
Other DBs
NCBI-ProteinID:
AGU53608
UniProt:
T1XLZ6
LinkDB
All DBs
Position
2:1073476..1074405
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AA seq
309 aa
AA seq
DB search
MPPAAQEAPASRQPDSAPKDTLGCMSSHLRRDQGLRANGVDIHRKTMDMHQLHHVQTEAS
ARGVLLGISMRDGHSRRILDGHRASCHDFDKGSIYIRSFSDRYRADIRRPFDFVLLEISP
ASLERAIEEKEGKRVGSLAYVAGVRDEVLLNLACALTPALEHPASASMLFVDQLSVAMTS
YLVETYGGAAAAAPRTNRLLSRSHEARAKEMLRSKIEGSISITEIADACGLSRSYFIHAF
RETTGYTPHQWLIAQRLEHARALLTDFDMPLADVAAACGFADQSHFTRVFAQHSGAPPGI
WRRRMRIGS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcccccggcggcccaggaagctcctgcgtcgcggcagcccgattccgccccaaaggac
acgctggggtgcatgtccagccatctgcgaagagaccagggcctccgtgcgaacggggtc
gatatccatcgcaagacaatggacatgcaccaactccaccacgtgcaaacggaggccagc
gcccgcggtgtgctgcttggcatctcgatgcgcgacggtcacagccggcgcattctcgac
gggcaccgcgcctcgtgccacgatttcgacaaggggtcgatctacattcgaagcttctcg
gatcgctatcgcgcggacatccggcgcccattcgacttcgtgctgctcgagatatcgccc
gccagcctcgagcgcgccatcgaggaaaaggagggcaagcgcgtcggcagcctcgcctac
gtggcgggtgtccgggacgaggtgcttctcaatcttgcgtgtgcgctgacgccggcgctc
gagcaccccgccagcgcgagcatgctgttcgtcgaccagttgagcgtggccatgacgagc
tatctcgtcgaaacctacggcggcgcagcggcggcggcacccagaaccaaccggctcctg
tcgcgctcgcacgaggcacgcgcaaaggaaatgttgcgcagcaagatcgaaggcagcatc
tcgatcaccgagattgccgacgcctgcggcctgtcacgcagctatttcattcacgccttc
cgcgagaccaccgggtacacgccccatcaatggttgatcgcacagcggctggagcatgct
cgcgcacttctcacggacttcgacatgccgctggcggacgtcgcggcggcttgcggtttt
gccgatcaaagccacttcacccgcgtcttcgctcagcattccggcgccccgccaggcatt
tggcggcgcaggatgcggatcgggagctag
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