Variovorax paradoxus B4: VAPA_2c11350
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Entry
VAPA_2c11350 CDS
T02835
Name
(GenBank) putative bacterial extracellular solute-binding protein
KO
K11959
urea transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_2c11350
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_2c11350
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Urea transporter
VAPA_2c11350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
AGU53689
UniProt:
T1XN40
LinkDB
All DBs
Position
2:1160362..1161528
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AA seq
388 aa
AA seq
DB search
MFSSPGSVMPRPPVFMPRGAPRRPPRSGAPFVRAERPALARQELQIALCVPLGGTAGIWG
PSAMSSAKLAVAELNREAGIGGRGCRLLTVNAADDAPDIEATLIELVQAGDIDAIIGMHT
SAVRQRILRAVGGQIPFVYTPLYEGGESTPGVFAIGETTARQLGPAIRWLGARKRPRRWF
AIGNDYVWPHVSHRMARGYIAETGGELVGEMYVPFGTTDFSEALDALRQGRADAVVLSLV
GQDAIEFNRAFGAAGLSRAMFRLSCAIGENELLGIGADNAEDLYVACGYFATLDTEANLA
FKERYRAHFGERAPTLNTFGQSTYEGMHFLAALLERQRRPAACDERLGASPLRYRSARDA
AYGADGITHTPIYLARAEGNVFRVITQL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgttttcttcccctggatcggtcatgcctcgcccgcccgtcttcatgccgcgtggcgcg
ccgcggcgtccgccgcgttccggcgcgccgttcgtgagggccgagcggccggcgctcgcg
cggcaggaactgcagatcgcgctgtgcgtgccgctgggcggcacggccggcatctggggg
ccgtccgcgatgtcgtcggccaagctggccgtcgccgagctcaaccgcgaggcgggcatc
ggcgggcgcggctgccggctcttgaccgtcaacgccgcggacgatgcgcccgacatcgag
gccacgctgatcgagctggtgcaggcgggcgacatcgacgccatcatcggcatgcacacc
agcgccgtgcgccagcgcatcctgcgggccgtcggcgggcagatcccgttcgtctacacc
ccgctctacgagggcggggagtcgacgccgggcgtcttcgccatcggcgagacgacggcg
cgccagctcgggccggcgatccgctggctcggcgcgcgcaagcgcccgcggcgctggttc
gccatcggcaacgactacgtgtggccgcacgtgtcgcaccgcatggcgcgcggctacatc
gccgagaccggcggcgagctggtcggcgagatgtacgtgcccttcggcaccaccgacttt
tccgaggcgctcgacgcgctgcgccagggcagggcagacgcggtcgtgctgtcgctggtc
gggcaggacgcgatcgagttcaaccgcgccttcggcgccgccggcctgtcgcgcgcgatg
ttcaggctgtcctgcgccatcggcgagaacgaactgctgggcatcggcgccgacaacgcg
gaggacctctacgtcgcctgcggctacttcgccacgctcgacaccgaagccaacctggcc
ttcaaggagcgctaccgcgcgcacttcggcgagcgtgcgcccacgctcaacaccttcggc
cagtcgacctacgagggcatgcacttcctggcggcgctgctcgagcgccagcggcgcccg
gcggcctgcgatgagcgcctgggcgcttcgccgctgcgctaccggagtgcgcgcgatgcg
gcctatggcgccgacggcatcacccacacccccatctacctggcccgtgcggagggcaac
gtgttccgcgtgatcacgcagctgtga
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