Variovorax paradoxus B4: VAPA_2c11370
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Entry
VAPA_2c11370 CDS
T02835
Name
(GenBank) putative ABC transporter, branched-chain amino acid-binding protein
KO
K11959
urea transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_2c11370
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_2c11370
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Urea transporter
VAPA_2c11370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
TAT_signal
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AGU53691
UniProt:
T1XMC9
LinkDB
All DBs
Position
2:1163271..1164497
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AA seq
408 aa
AA seq
DB search
MDRRSFIQSSAAALAGTAVPLFPMAAMAADEIVVGSIVDMSGGLDIYGKPMADCMTLAVE
EQNAAGGLLGKKLRLATYDPQSNMQLYAQFAQQSALKDKSTVVMGGITSASREVIRPVLT
RNKTLYFYNTQYEGGVCDRNTFCTGVTPGQTVAKLIPYAMKKWGKKVYVVAADYNYGQIT
SQWVKKFVQDNGGSVASIDFFPLDVTNFGPTISKIEAAKPDMIVSALVGGAHISFYRQWA
AAGLTKKIPLASTTFAGGNEHIVLSQAETDGFLISYNYFQNLDTPQNKAFKERFYKRFGA
DYPNITELAMGTYQGFKLWAEGVKKAGSLDREKMIAALETGISIDGPSGKVTLDAATHHC
VLNVSIAEVRNKQLNIVETFQQQPPVDTSAVCNLVKNPKDNQQYVIKV
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtcgttccttcatccagtcgtcggccgccgccctggcgggcaccgcggtgccg
ctgttcccgatggccgccatggcggccgacgagatcgtcgtcggcagcatcgtcgacatg
tcgggcggactggacatctacggcaagccgatggccgactgcatgacgctcgcggtcgag
gagcagaacgcggccggcggcctgctgggcaagaagctcaggctggccacctacgacccg
cagtcgaacatgcagctctacgcgcagttcgcgcagcagtcggcgctcaaggacaagtcg
acggtggtgatgggcggcatcacctcggcctcgcgcgaggtgatccggccggtgctcacg
cgcaacaagacgctgtacttctacaacacgcagtacgagggcggcgtgtgcgaccgcaac
accttctgcaccggcgtcacgcccgggcagaccgttgccaagctcatcccctatgcgatg
aagaagtggggcaagaaggtctacgtggtggcggccgactacaactacggccagatcact
tcgcagtgggtgaagaagttcgtgcaggacaacggcggctcggtggcttccatcgacttc
ttcccgctcgacgtgaccaacttcggcccgaccatctcgaagatcgaggcggccaagccc
gacatgatcgtctcggcgctggtgggcggcgcgcacatctccttctaccgccagtgggcc
gcggcgggcctgacgaagaagatcccgctcgcgtccacgacgtttgcgggcggcaacgag
cacatcgtgctgtcgcaggccgagaccgacggcttcctcatttcgtacaactatttccag
aacctcgacacgccgcagaacaaggccttcaaggagcgcttctacaagcgcttcggtgcc
gactaccccaacatcaccgaactcgcgatgggcacctaccagggcttcaagctctgggcc
gagggcgtgaagaaggccggctcgctggatcgcgagaagatgatcgcggccctggagacc
ggcatcagcatcgacggcccgagcggcaaggtcacgctcgatgcggccacccaccactgc
gtgctgaacgtgagcatcgcggaggtgcgcaacaagcagctcaacatcgtcgagaccttc
cagcagcagcccccggtggacaccagcgcggtgtgcaacctcgtgaagaatccgaaggac
aaccagcagtacgtgatcaaggtctga
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