Variovorax paradoxus B4: VAPA_2c11420
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Entry
VAPA_2c11420 CDS
T02835
Name
(GenBank) putative amidase
KO
K01426
amidase [EC:
3.5.1.4
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00330
Arginine and proline metabolism
vpd00360
Phenylalanine metabolism
vpd00380
Tryptophan metabolism
vpd00627
Aminobenzoate degradation
vpd00643
Styrene degradation
vpd01100
Metabolic pathways
vpd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
VAPA_2c11420
00360 Phenylalanine metabolism
VAPA_2c11420
00380 Tryptophan metabolism
VAPA_2c11420
09111 Xenobiotics biodegradation and metabolism
00627 Aminobenzoate degradation
VAPA_2c11420
00643 Styrene degradation
VAPA_2c11420
Enzymes [BR:
vpd01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.4 amidase
VAPA_2c11420
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GFIT
Motif
Pfam:
Amidase
Motif
Other DBs
NCBI-ProteinID:
AGU53696
UniProt:
T1XMD3
LinkDB
All DBs
Position
2:1167897..1169294
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AA seq
465 aa
AA seq
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MSNELHYLELVDVGRRIQRQALSPVEVTQAQLARIEKVDGALKSYVIVMAEQALADARRA
EAEIARGEIRGPLHGVPVAVKDLCWTKGVATTAGMTLYRDFVPTEDGTAVRKLREAGAVI
LGKLQLTESAYADHHPSVTPPANPWNAAHWSGASSSGSGVATAAGLCYGSLGTDTGGSIR
FPSSANGLTGLKPTWGRVSRHGAFELAATLDHIGPMTRSAADAGAMLGAIAGADPKDPTA
SLAAVPNYLAGMERGLRGLRVGIDARWNGEGVDAATAQVMEGALAAVRELGAEVRHVTFP
DPAQVIADWFPLCGIEAAVVHESTYPARKQMYGPALSGLLDLGRAQSGIDYQKIVLRRHA
FSGRVREMFEGIDLLLMPAQGVASPTLERMLSFGEDAGLMSAMLRYTCPLDMSGSPTITL
PGGFTDAGTPVAFQFVARHFEEELLVRAGWAFQQATDWHRRHPAL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgaactgcattacctcgagctggtcgacgtcggccggcgcatccagcgccag
gcgctctcgccggtcgaggtcacgcaagcgcagctcgcgcgcatcgaaaaggtcgacggc
gcgctcaagagctatgtgatcgtgatggccgaacaggcgctggccgacgcgcgccgcgcc
gaggccgagatcgcccggggcgagatccgcgggccgctgcacggcgtgccggtggcggtg
aaggacctgtgctggacaaaaggcgtggccaccaccgccggcatgacgctctaccgcgac
ttcgtgcccaccgaggacggcaccgccgtgcgcaagctgcgcgaagccggggccgtgatc
ctcggcaagctgcagctcaccgagagcgcctacgccgaccaccaccccagcgtcacgccg
ccggccaatccgtggaacgcggcgcactggtcgggtgcctcgtcgagcggctcgggcgtg
gccacggccgcagggctgtgctatggctcgctcggcaccgacaccggcggctcgatccgc
tttccgtcctccgccaatggcctcaccggcctgaagccgacctggggccgcgtgagccgc
catggcgccttcgagctggccgccacgctcgaccacatcggcccgatgacgcgcagcgcg
gccgatgcgggtgcgatgctcggcgccatcgcgggggccgatccgaaagacccgaccgcg
agcctcgcggccgtgcccaactacctcgcgggcatggagcgcggcttgcgcggcctgcgc
gtgggcatcgacgcgcgctggaacggggagggcgtcgatgcggccaccgcgcaggtgatg
gaaggcgcgctcgcggccgtgcgcgaactcggcgccgaggtgcgccacgtgaccttcccc
gacccggcgcaggtcatcgccgactggttcccgctctgcggcatcgaggcggccgtggtg
cacgagtcgacctatcctgcacgcaagcagatgtacggccccgcgctctcgggcctgctc
gacctgggccgtgcgcagagcggcatcgactaccagaagatcgtgctccgccgccatgcc
ttcagcggcagggtgcgcgagatgttcgagggcatcgacctgctgctgatgcccgcgcag
ggcgtcgcctcgccgacgctcgagcgcatgctgagcttcggcgaggacgccgggctgatg
tccgcgatgctgcgctacacctgtccgctggacatgagcggcagcccgacgatcacgctg
cccggcggtttcaccgatgcgggcacgccggtcgcgttccagttcgtcgcgcgccacttc
gaggaagagctgctggtgcgcgccggctgggccttccagcaggcgacggactggcaccgg
cggcatccggcgctgtag
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