Variovorax paradoxus B4: VAPA_2c11730
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Entry
VAPA_2c11730 CDS
T02835
Symbol
palE
Name
(GenBank) putative ABC transporter, substrate-binding protein PalE
KO
K02012
iron(III) transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_2c11730 (palE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_2c11730 (palE)
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Iron(III) transporter
VAPA_2c11730 (palE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_11
SBP_bac_8
SBP_bac_1
Phosphonate-bd
PBP_like_2
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
AGU53727
UniProt:
T1XLH5
LinkDB
All DBs
Position
2:1200743..1201726
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AA seq
327 aa
AA seq
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MIRNFLKLSGFLILGGFWSVAATAGNVVLYSSNNVETVNAVVDQFTKRHPGIKVSVVRAG
TGALMQRIKAEAANPLGDIFWSGGLSTISEFREQLAPYASPQAVAVPAAYRGPDGLWLGT
NTHVTVLMANLRQVPNGQPPSGWADLADPKWKGKIVIPDPERSSASYVALYGLQQLLGDA
ALEKIARNAVIVGTTSAAYEGVAKGEFAVAVTMEYAAYEYVAGGLKEVRLVYPTEGTFLS
PEGMALIKGGKNPEDARTFYEFLASRPAQTEIFKTAYRRPLRADVDVSKLSDLPALSTIK
VVALDDARMGADRAAFIARWRQLVGAR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcaatttcttgaagctatcaggattcctcattctcgggggcttctggtccgtg
gcggcaacggccggcaacgtcgtcctctactcctcgaacaatgtggagaccgtcaacgcg
gtcgtcgatcagttcacgaagcgccatcccggcatcaaggtttcggtggtccgtgccggc
acgggtgcgctgatgcagcgcatcaaggcggaggcagccaatcccctgggcgacattttc
tggtcggggggcctgtcgacgatcagcgagttccgggagcagctcgcgccctatgcgtcg
ccgcaggccgtcgcggtgccagcggcctatcgcggtcctgacggactgtggctagggacg
aacacgcacgtcaccgtgctgatggccaatctgcgccaggtcccgaacggccagccgccc
agcggttgggcggacctcgccgatcccaaatggaaaggcaagatcgtcattcccgacccg
gagcgcagcagcgcttcgtacgtcgcgctctacggtctccagcagctgctcggcgatgcc
gctctggagaagatcgcgcgcaacgcggtgatcgtcggcaccacgtcggcggcctacgag
ggcgtcgccaagggtgaattcgccgtcgcggtgaccatggaatatgcggcctacgagtac
gtggccggcggcctgaaggaagtccggttggtctatcccaccgaaggcacctttttgtcg
ccggaaggcatggcgctcatcaagggtggcaagaacccggaggacgctcgcacgttctac
gaattccttgcatcgcgcccggcgcagacggagatcttcaagaccgcctatcggcgtccg
ttgcgcgcggatgtcgatgtgagcaagttatcggacctgccggccctctcgacgatcaag
gtcgtggcactggatgacgcgcgcatgggcgccgatcgcgcggcgttcattgcacgctgg
cggcagctcgtcggcgctcgctga
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