Variovorax paradoxus B4: VAPA_2c11830
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Entry
VAPA_2c11830 CDS
T02835
Name
(GenBank) transcriptional regulator, LysR family
KO
K11921
LysR family transcriptional regulator, cyn operon transcriptional activator
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_2c11830
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
LysR family
VAPA_2c11830
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
AGU53737
UniProt:
T1XLI3
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All DBs
Position
2:complement(1209925..1210806)
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AA seq
293 aa
AA seq
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MEIRQLRYFLDIAQTEHLTQSAQNLFVTQSTLSHGLRLLEQELGVALFDRLGRGLKLSQA
GAEFRAYATRALKEVESGRMALADLNGLRSGRLTVGAFPTFLNTVVPATVAAFSQAYPGV
RVEVRDLRAGPIEEQLLSGELDLGIAFHPATREDIETEPLFDERLLLVVGPMHPLAGRRS
IAMKALARVPLALLPRTFATRRMIDEALRSVSTAVEIRVEMDSVESLLGVCRHGELASIV
PERAASQAPDLHAVVLTAPTLVRHAGILWRRGASRNAAAREFAALLRASPIQE
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggaaatccgccagctgcgctactttctggacatcgcccagaccgagcacctgacgcaa
tcggcgcagaacctgttcgtcacccagtcgacgctgtcgcacgggctgcggctgctcgaa
caggaactgggcgtggcgctgttcgatcgcctggggcggggcctgaagctctcacaggcc
ggtgcggagtttcgcgcgtatgccacgcgcgcgctcaaggaggtcgagtcgggccgcatg
gccctcgccgacctgaacggcttgcgctccggccgcctgacggtgggcgcctttcccacc
ttcctgaacaccgtggtgcccgccaccgtcgcggccttcagccaggcctaccccggcgtg
agggtcgaggtgcgcgacttgcgcgcaggaccgatcgaggagcaactgctcagcggcgag
ctcgacctgggcatcgccttccaccctgccacgcgtgaagacatcgagaccgaaccgctg
ttcgacgaacgcctgttgctggtggtcgggccgatgcatcccctggccggccggcgcagc
atcgcgatgaaggcccttgcccgcgtgccgctggcactgctgccaagaacctttgccacg
cgccgcatgatcgacgaggccctgcgctcggtgagcacggcggtcgagatccgggtcgag
atggactccgtggagtccctgctcggcgtctgccgccacggcgaacttgccagcatcgtg
cccgagcgtgccgcaagccaggcaccggacctgcacgcggtcgtcctgaccgcgccaacg
cttgtgcggcacgccggcatcctctggcggcgcggcgcgtcacgcaatgccgccgcacgc
gagttcgcggcactgctgcgcgcctcgcccattcaagaataa
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