Variovorax paradoxus B4: VAPA_2c11840
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Entry
VAPA_2c11840 CDS
T02835
Name
(GenBank) putative muconate/chloromuconate cycloisomerase
KO
K01856
muconate cycloisomerase [EC:
5.5.1.1
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00361
Chlorocyclohexane and chlorobenzene degradation
vpd00362
Benzoate degradation
vpd00364
Fluorobenzoate degradation
vpd00623
Toluene degradation
vpd01100
Metabolic pathways
vpd01120
Microbial metabolism in diverse environments
vpd01220
Degradation of aromatic compounds
Module
vpd_M00568
Catechol ortho-cleavage, catechol => 3-oxoadipate
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
VAPA_2c11840
00364 Fluorobenzoate degradation
VAPA_2c11840
00361 Chlorocyclohexane and chlorobenzene degradation
VAPA_2c11840
00623 Toluene degradation
VAPA_2c11840
Enzymes [BR:
vpd01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.1 muconate cycloisomerase
VAPA_2c11840
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GFIT
Motif
Pfam:
MR_MLE_C
MR_MLE_N
MAAL_C
Enolase_C
ThiG
Motif
Other DBs
NCBI-ProteinID:
AGU53738
UniProt:
T1XMB1
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All DBs
Position
2:1210927..1212120
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AA seq
397 aa
AA seq
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MTGRFRIERIEARILDIPTIRPHRLSFGAISRQSPVIVQLWLGNGASGFGEAATIGGPSW
NEESPEGIRHAIEAYLAPVLLGQEGGCFSDALDRMDAACKGNAFAKSAVEMALIDAMART
LGLPAWQLLGGKRRQSLPLAWTLASGDVARDLEEAQLRLEQRRHRIFKMKIGARSPEDDV
SHVAQIARALEGRATLTVDINQAWDGSTARRHLPRLIDAGVSLIEQPVAKWNVEALAVLS
TELGARACIMADETVCTPQDAMRLARAKACHVFSLKVAKHGGLLRTREVAAVAEAADIGW
YGGTMLETSIGSAAAAHVFSTLGKQHHGCELFGPQLLVDDLVVQRMEIRDFELQLPDGPG
FGVDVDPAQLERFDRARTGLVPVHIDLGHRAPFTQGA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgacgggtcgttttcgcatcgagcggatcgaggcgcggatactggacatccccaccatc
cggccgcacaggctgtccttcggggcgatcagccggcagagtcccgtcatcgtccagctg
tggctcggcaatggtgcgagtggcttcggcgaggccgccacgatcggcgggccttcgtgg
aacgaggaatcgcccgaaggcatacggcacgccatcgaggcctatctcgcgcccgtgctg
ttgggacaggagggtggctgcttctcggatgccctggaccggatggacgccgcctgcaag
ggcaatgcattcgccaagagcgccgtcgagatggcactgatcgatgcgatggcgcgcacg
ctcgggctgcctgcgtggcagctgctcggcggcaagcgccggcagagtctgcccttggca
tggacgctggccagcggggatgtggcgcgcgacctggaagaggcgcagctgcgcctggaa
cagaggcgccaccggatcttcaagatgaagatcggtgcgcgttcccccgaggacgacgtg
agccatgtcgcgcagatcgcgcgggccctcgaagggcgggccaccctcaccgtggacatc
aaccaggcgtgggacggcagcacggccaggcgccatctgccgcgcctgatcgacgcgggc
gtcagcctgatcgagcagccggtggcgaaatggaacgtggaagcgctcgcggtgctgagc
accgagctcggcgcccgcgcctgcatcatggcggacgagaccgtgtgcacgccgcaggat
gccatgcggctcgcgcgcgccaaggcgtgccatgtcttctcgctcaaggttgccaagcac
ggcggcttgctgcgcacccgcgaagtggcggcagtggccgaggccgccgacatcggctgg
tatggcggcacgatgctcgagacctcgatcggcagcgcggccgccgctcacgttttctcg
accctcggcaagcagcaccacggctgcgaattgttcgggccgcagttgctggtggacgac
ctggtggtccagcggatggagatccgcgacttcgaactgcagttgcccgatggtcccggc
ttcggcgtcgacgtggatccggcgcagctggagcgcttcgaccgcgcgcgcaccggcctc
gtgccggtgcacatcgacctcgggcaccgcgcccctttcacccagggagcatga
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