Variovorax paradoxus B4: VAPA_2c12220
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Entry
VAPA_2c12220 CDS
T02835
Name
(GenBank) putative ABC transporter, branched-chain amino acid-binding protein
KO
K11959
urea transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_2c12220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_2c12220
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Urea transporter
VAPA_2c12220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
TAT_signal
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
AGU53775
UniProt:
T1XNS9
LinkDB
All DBs
Position
2:1248268..1249416
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AA seq
382 aa
AA seq
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MDRRTFLHGLAAAAAASSSAVRAASPLNVAVMLPMSGPAGLFGPSAKACAELAVQTINAR
GGVLGRNINALFGDAGLPPAEASQTALKLWKGQGAQAVIGMHDSAVRGALVGLFKGQVPY
FYTPVYEGGECARGTYVNGETPAQQLAPVIPWLASERKPKKWYMIGNDYIWGRNTNAAAK
GYIAQTGAQVVGDEYLPFTADNFDSSLARIRDSGADAVLVSLVGGASVTFNKAFASFGLP
DKAIRLGTLIEENTLAGIGLANARNLYSSAGYFANIETPAAKAFSDAYFKRFGAQAPALN
GLAESVYEGFLMLEAMAVRAKSLEVAKLEPASEGAGYNGPRGAVTMHARHVDQDIYLADV
GDKGFRVVKTFPRIASGQSCKA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtcgtacctttctccacggccttgcggccgccgcggctgccagttcttcggcc
gtgcgcgcggcatcgccgctcaacgtggccgtcatgctgccgatgagcgggccggccgga
ctcttcggcccctcggccaaggcctgcgccgagctggccgtgcagacgatcaacgcccgc
ggcggcgtgctcggccgcaacatcaacgcgctcttcggcgatgccgggctgccgcccgcc
gaagcgtcgcagaccgcgctcaagctctggaaagggcagggcgcacaggcggtgatcggc
atgcacgacagcgcggtgcgcggcgcgctggtggggctcttcaagggccaggtgccgtat
ttctacacgccggtgtacgaaggcggcgaatgcgcgcgcggcacctacgtgaacggcgag
acgcccgcgcagcagctcgcgccggtgatcccgtggctggcctcggaacgcaagccgaag
aagtggtacatgatcggcaacgactacatctggggccgcaacaccaacgccgcggccaag
ggctacatcgcccagaccggcgcccaggtcgtcggcgacgagtacctgccgttcaccgcc
gacaacttcgattcgagcctggcccgcatccgcgacagcggcgcggacgcggtgctggtg
tcgctggtgggcggtgcttccgtcactttcaacaaggccttcgcgagcttcgggctgccc
gacaaggcgatccgccttggcacgctgatcgaggagaacacgctggccggcatcggcctg
gccaacgcgcgcaacctgtattcgagcgcgggctatttcgccaacatcgagacgccggcg
gccaaggccttctcggacgcctacttcaagcgcttcggcgcccaggcgcccgcgctcaac
ggcctggccgaatcggtctacgaaggcttcctgatgctggaggcgatggccgtgcgcgcc
aagtcgctcgaagtggcgaagctggagccggccagcgaaggcgcgggctacaacggcccg
cgcggcgccgtcaccatgcatgcgcggcatgtcgaccaggacatctacctcgccgacgtg
ggcgacaagggctttcgcgtcgtgaagaccttcccgcgcatcgcgtcgggccaatcctgc
aaggcgtga
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