Variovorax paradoxus B4: VAPA_2c12300
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Entry
VAPA_2c12300 CDS
T02835
Name
(GenBank) branched-chain amino acid ABC transporter, ATP-binding protein
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_2c12300
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_2c12300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_2c12300
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_2c12300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_28
AAA_16
AAA_23
SMC_N
AAA_15
BCA_ABC_TP_C
AAA_27
AAA_25
AAA_30
AAA_22
ABC_ATPase
RsgA_GTPase
nSTAND1
NACHT
SRP54
TsaE
PduV-EutP
AAA_33
MMR_HSR1
DO-GTPase2
AAA
DUF2813
AAA_5
DUF3584
AAA_18
MobB
AAA_13
Motif
Other DBs
NCBI-ProteinID:
AGU53783
UniProt:
T1XMF5
LinkDB
All DBs
Position
2:complement(1256575..1257303)
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AA seq
242 aa
AA seq
DB search
MSSATTGSSAALEVRGLFAGYGRIEALHGIDLRLGRGELVALIGANGAGKTTLLRALSGL
IKPSAGSVSLFGREIGRESADARVRAGLSQVLEGRQVFGPLSVQDNLLLGSYTRPERRQQ
RMEEMYALFPILQEKRLLAAGTLSGGQQQMLAIARALMSEPKVLLLDEPSMGLAPLLVKE
IFGVIARLKAQGIPILLVEQNAHAALSVADVGYVLETGTITLGGPAAQLLRDERVKAAYL
GL
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgcaactaccggcagcagcgccgcgctcgaagtgcgcggcctcttcgccggc
tacggccgcatcgaggcgctgcacggcatcgacctgcggctcggccgcggcgaactggtg
gcgctgatcggcgccaacggcgcgggcaagacgacgctgctgcgcgcgctctccggcctc
atcaagcccagcgcaggcagcgtgagcctgttcggccgagagatcggccgcgagagcgcc
gacgcgcgcgtgcgcgccgggctgtcgcaggtgctggaaggccggcaggtcttcgggccg
ctctccgtgcaggacaacctgctgctgggcagctacacccgccccgaacgccgccagcag
cgcatggaagagatgtacgccctgtttcccatcctgcaggagaagcgcctgctcgccgcc
ggcacgctctcgggcggccagcagcagatgctggccattgcccgcgccctgatgagcgag
cccaaggtgctgctgctcgacgaaccttcgatgggcctggcgccgctgctggtgaaggag
atcttcggcgtgatcgcgcggctgaaggcgcagggcatcccgatcctgctggtggagcag
aacgcgcacgccgcgctgtcggtggccgacgtcggctatgtgctggaaaccggcaccatc
acgctcggcggcccggccgcgcagctgctgcgcgacgagcgcgtgaaggccgcctacctc
ggactgtga
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integrated database retrieval system
