Variovorax paradoxus EPS: Varpa_0026
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Entry
Varpa_0026 CDS
T01392
Name
(GenBank) penicillin-binding protein, 1A family
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00550
Peptidoglycan biosynthesis
vpe01100
Metabolic pathways
vpe01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Varpa_0026
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Varpa_0026
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vpe01003
]
Varpa_0026
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vpe01011
]
Varpa_0026
Enzymes [BR:
vpe01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Varpa_0026
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Varpa_0026
Glycosyltransferases [BR:
vpe01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Varpa_0026
Peptidoglycan biosynthesis and degradation proteins [BR:
vpe01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Varpa_0026
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
ADU34249
LinkDB
All DBs
Position
28009..30411
Genome browser
AA seq
800 aa
AA seq
DB search
MFKRSSPSRPDDGATPDERNARWRLIGKWSAIVVGSGALVVLVASIVAVVAIYPKLPDIS
ELADYRPKLPLRVYSTEGTLIGEFGEERRNLTPFASIPKVMKDAVLAVEDARFYDHGGVD
YKGFVRAAVASLKGGRKQGASTITMQVARNVYLSSERTLSRKTYEIMLAFRLEQQLTKDQ
ILEIYLNQIYLGNRAYGFAAASEAYFGKPLQNVTIAEAAMLAGLPKAPGANNPVANPRRA
RARQLYVIDRMQETGFITAEQAAEAKKEELHLRDAADPNRLHAEYVAETVRQMMYTQYGD
SIYTSGMKVYTSLVAADQAAAYKSLRKGIMDYERRQVYRGPEKFVDLPTEQKEVDEAVDD
ALAEHPDNGDVIAAVVLDANAKEISAVRANGEAIQITGEGLKPAQSGLAAKAPPNIKIRR
GAVIRMAKTPKGTWEITQLPEVEGAFIAMDPRSGAIKALVGGFDFGKNKFNHVTQAWRQP
GSSFKPFIYSAALEKGFTPATVVNDAPLYFDAAANGGQPWEPKNFEGTYEGPMPLRTALM
KSKNLVTLRVLQSIGAPYAQDWVTKFGFDKDKQPANLPMGLGAGSVTPMQMAVGYSVFAN
GGYRVNPYLVTRITDMKDKVIMETEPPVLDEARRAIPARNAFVMDSLLQSVVKGGTAFKA
HQALKRDDLYGKTGTTNDSFDTWFAGFQPTRVGIAWIGYDTPRQLGVRGETGGSLSLPIW
IGYMQSALQGVPVTQPTAPPGVVSIDGEWYFDDFTPGHNVASLGLENAEQAPPPVEELTG
APIGAPPPPEERNRILDFFR
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaacgttcaagcccctcccgacccgacgacggcgccacgccggacgaacgcaac
gcccgctggagactcatcggcaaatggagcgccatcgtggtgggctccggcgcactggtg
gtgctggtcgcatccatcgtcgcggtggttgccatctatccgaagctgcccgacatctcc
gaacttgccgactaccggcccaagctgccgctgcgcgtgtattccaccgaaggcacattg
atcggagagttcggcgaagagcgccgcaacctcacgccctttgcgagcattcccaaggtc
atgaaagacgcggtactcgccgtggaagacgcccgcttctacgaccacggcggcgtcgac
tacaagggcttcgtgcgcgccgcggtggccagcctgaagggcggcaggaagcagggcgcc
tcgaccatcaccatgcaggtggcgcgcaacgtctatctgagctcggagcgcacgctgagc
cgcaagacctacgagatcatgctggccttccggctcgagcagcagctcacgaaggaccag
atcctcgagatctacctgaaccagatttatctcggcaaccgcgcctacggttttgccgct
gcgtcggaagcgtatttcggcaagcccctgcagaacgtgacgatcgccgaagccgcgatg
ctcgccggcctgcccaaggcccccggcgcgaacaacccggtggccaacccgcgccgtgcg
cgcgcacgccagctctacgtgatcgaccgcatgcaggagaccggcttcatcaccgccgaa
caggcagccgaagccaagaaggaagaactgcacctgcgcgacgcggccgacccgaaccgc
ctgcatgccgagtacgtcgccgaaaccgtgcggcagatgatgtacacgcagtacggcgac
agcatctacaccagcggcatgaaggtctacacctcgctggtcgcggccgaccaggcggct
gcctacaagtcgctgcgcaagggcatcatggattacgagcgccgccaggtttatcgcggg
cccgagaagttcgtcgacctgccgaccgagcagaaggaagtcgatgaggccgtggacgac
gcactcgccgaacatcccgacaacggcgatgtgatcgctgccgtcgtgctcgatgccaac
gcgaaagaaatcagcgccgtgcgcgccaacggcgaagcgatccagatcaccggcgagggc
ttgaagcccgcgcagtcgggcctcgcggccaaggcaccgcccaacatcaagatccgccgc
ggtgcggtgatccgcatggcgaagacgccgaagggcacctgggagatcacgcagctgccc
gaagtggaaggcgccttcatcgcgatggacccgcgcagcggcgcgatcaaggcgctggtg
ggcggtttcgatttcggcaagaacaagttcaaccacgtcacgcaggcctggcgccagccg
ggttcgagcttcaagccgttcatctattcggccgcgctcgaaaagggcttcacccccgcc
acggtggtgaacgatgcgccgctgtatttcgatgctgccgccaacggtggccagccgtgg
gagccgaagaatttcgaaggcacctacgaaggcccgatgccgctgcgcaccgcgttgatg
aaatcgaagaacctggtgacgctgcgcgtgctgcagtcgatcggcgcgccctatgcgcag
gactgggtcaccaagttcggcttcgacaaggacaagcagcccgccaacctgccgatgggc
ctgggcgccggttcggtcacgccgatgcagatggccgtgggctattcggtgttcgccaac
ggcggctaccgcgtcaatccgtacctggtcacccgcatcaccgacatgaaggacaaggtc
atcatggaaaccgagccgccggtgctcgacgaagcacggcgcgccatccccgcgcgcaat
gccttcgtcatggattcgctgctgcaaagcgtggtgaagggcggcaccgcgttcaaggcg
caccaggccctgaagcgcgacgacctctatggcaagaccggcaccaccaacgattccttc
gacacctggttcgcgggtttccagcccacgcgcgttggcatcgcatggatcggctacgac
acgccgcgccagctcggcgtgcgcggcgaaaccggcggcagcctgagcctgccgatctgg
atcggctacatgcagtcggcgctgcagggcgtgccggtcacgcagccgactgcaccgccg
ggcgtggtgagcatcgacggcgagtggtacttcgacgacttcacgccggggcacaacgtg
gcgagcctgggcctggagaacgccgagcaggcaccaccgccggtcgaagagctcaccggc
gcgccgatcggggcaccgcctccgcctgaagagcgcaaccgcatcctcgatttcttcagg
taa
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