Variovorax paradoxus EPS: Varpa_0090
Help
Entry
Varpa_0090 CDS
T01392
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_0090
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_0090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_0090
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Varpa_0090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
DUF6644
FilR1_middle
Motif
Other DBs
NCBI-ProteinID:
ADU34312
UniProt:
E6UYY3
LinkDB
All DBs
Position
complement(90659..91873)
Genome browser
AA seq
404 aa
AA seq
DB search
MNITLSRTALAVALGAAFTTTGASAQVSDDTIRIGFISDMSGIYRDYDGPAGAEAIRMAI
ADMGGAIDGRKIELVTADHQNKPDIAAAKAREWFDVQKVDMLIAGVNSGAAIAMAGVAAD
KKKPYFVVGSGASSLTNEYCSPYTVHYAYDTVAMARGTATAVVKAGGKSWYFVTADYAFG
AALQTDAAKIINASGGTVAGSVKHPLGASDFSSFMLQAQGSKAQVLALANAGGDTVNAIK
SAAEFGISKNMKLAGMIITINDVHALGLKTSQGMYLTDSWYWNQSPEARTWARRFFDKHK
RMPSSFHAGDYSAALQYLQAVKAAGSDDADKVMAQLRKTKFNDMFVKGGWLRDDGLMVHD
MQLMQVKTPDESKEPWDYYKVVEPIRGEAAWTTKAESRCARWKS
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaccctctcgcgcactgcgctcgctgtcgcactcggcgcggccttcaccacc
accggcgcctcggcgcaggtgtcggacgacaccatccgcatcggcttcatcagcgacatg
tcgggcatctaccgcgactacgacggcccggccggcgcggaggccatccgcatggccatt
gccgacatgggcggcgccatcgacggcaggaagatcgagctggtcacggccgaccatcag
aacaagcccgacatcgcagccgccaaggcacgcgagtggttcgacgtgcagaaggtcgac
atgctgatcgcgggcgtcaactcgggcgcggcgattgccatggcgggcgtggcggccgac
aagaagaagccgtacttcgtggtcggctcgggcgcatcgagcctcaccaacgaatactgc
tcgccctacacagtgcactacgcctacgacacggtggcgatggcgcgcggcaccgcgacc
gcggtggtcaaggcgggcggcaaaagctggtacttcgtcaccgccgactacgccttcggc
gccgcgctgcagaccgacgcggccaagatcatcaacgccagcggcggcacggtcgcgggc
tcggtgaagcacccgctgggcgcgagcgatttctcgtcgttcatgctgcaggcgcagggc
tcgaaggcgcaggtgctggcgctcgccaatgcgggcggcgacacggtgaacgcaatcaag
tcggcggcggaattcggcatcagcaagaacatgaagctggccggcatgatcatcaccatc
aacgatgtgcacgcgctgggcctgaagacctcgcagggcatgtacctcaccgacagctgg
tactggaaccagagccccgaggcgcgcacctgggcgcggcgcttcttcgacaagcacaag
cgcatgccctcctccttccatgccggcgactactcggccgcgcttcaatatctgcaggcg
gtgaaggcggccggcagcgacgatgccgacaaggtgatggcgcaactgcgcaagacgaag
ttcaatgacatgttcgtcaagggcgggtggctgcgcgacgacggcctcatggtgcacgac
atgcagttgatgcaggtgaagacccccgacgaatcgaaagagccgtgggactactacaag
gtggtcgagccgatccgcggcgaggccgcatggacgacgaaggcagagagccgctgcgcg
cggtggaaatcatga
DBGET
integrated database retrieval system
