Variovorax paradoxus EPS: Varpa_0106
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Entry
Varpa_0106 CDS
T01392
Name
(GenBank) TonB-dependent siderophore receptor
KO
K16088
outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_0106
Transporters [BR:
vpe02000
]
Other transporters
Pores ion channels [TC:
1
]
Varpa_0106
BRITE hierarchy
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
Motif
Other DBs
NCBI-ProteinID:
ADU34328
UniProt:
E6UYZ9
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All DBs
Position
complement(106391..108859)
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AA seq
822 aa
AA seq
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MHAQPHHPAAPFPRNRLRLALRLACAMALSTAGPLALAQAANPAPARGANAVYDIPASPL
AAALNQFAQQAGVAIALDAGKLRDLRSPGLKGRYGVEDGFAALLAGSGQALGRTSAGYLL
VPAAETAPPAAAPARPRQETTANQTLGEVTVTANQLGEITEGTRSYTPGAIATATRLVLS
PRETPQTVSVVTRQQMDDFGMTSIDDVIRATPGVSIVTYDSERTEYYARGFAIQNFQYDG
IPMRRDSAYSAGNTLTDTSIYDRVEVLKGATGLLTGSGEPGATINLVRKKPTRAFQGQLS
ASAGSWNTYRTEADLSGALNESGSVRGRVVAALQDRHSQLDHYKRSSKVFYGVLEADLTP
STLLTVGADYQDNDPKGSTWGGIPIFNSLGNFNSMPRSFNNGARWSGWGQYTRTGFSTLE
HQFGNGWVAKVQYNHQINGYDALLGAAAGGNPNPLDGSGTSMWLGKYVGRTTSDALDAYA
SGPFKLLGREHELVVGASIARRRWKNDGYNFPGYQTNVSGYYGWTGQVPFPVSSATPDFS
DNEVTRERGLYAATRLNLSDRLKLIAGARVSSYRNKDIDRSGEVAPYAGLIFDLTPQLSA
YGSYTTIFMPQSSQDVNGRTLDPQDGKNQEVGLKGSFLDGKLNASLAYFHLEQNNYPEAT
GGLTPRGGQAYRAIQGVVAKGVEAEVSGELAPGWQLHAGFTHKVAKQDRKKVSTLEPEDQ
FSLYTTYRLRGALQGWTLGGGARWQSKSWGDASNPVLGTTTFTTDAYWLFDLMARYEFSP
RLSATLRVNNALDKKYMTVFSWYSTYTWGEPRSVNVNLVYKF
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgcacgctcaaccgcaccaccccgcggcgcccttcccgcgcaaccgcctgcgcctggct
ctccgcctcgcctgcgcgatggcgctgtccaccgccggcccgctggccctcgcccaggcc
gcgaaccccgcaccggcgcgcggcgcgaacgccgtctacgacatcccggccagcccgctg
gccgcggccctgaaccagttcgcacagcaggccggcgtggcgatcgcgctggatgccggc
aagctgcgcgacctgcgctcgcccgggctgaagggccgctacggcgtggaggacggcttc
gcggcgctgctcgccggcagcggccaggcgctgggccgcacctcagccggctacctgctg
gtgccggccgccgagaccgcaccaccggccgcggccccggcccggccccgacaggaaacg
acggccaaccagaccctcggcgaagtcaccgtcacggccaaccagctcggcgaaatcacc
gaaggcacgcgctcctacacgcccggcgcgatcgccaccgccacccggctggtgctatcg
ccgcgcgagacgccgcagaccgtcagcgtcgttacgcgccagcagatggacgacttcggc
atgacctcgatcgacgacgtgatccgcgccacgccgggcgtgagcatcgtcacctacgac
agcgagcgcaccgagtactacgcgcgcggcttcgcgatccagaacttccagtacgacggc
attccgatgcggcgcgattcggcctactcggccggcaacacgctcaccgacacctcgatc
tacgaccgcgtcgaggtgctcaagggcgccaccgggctgctcaccggcagcggcgaaccc
ggcgccaccatcaacctggtgcgcaagaaacccacgcgcgcgttccagggccagctcagc
gcaagcgccggttcgtggaacacctatcgcaccgaggccgacctgagcggcgccctcaac
gaaagcggcagcgtgcgcggccgcgtggtggcggcattgcaggaccgtcattcgcagctc
gaccactacaagcgcagcagcaaggtcttctacggcgtcctcgaggccgacctcacgccc
agcacgctgctgaccgtgggcgccgactaccaggacaacgaccccaagggctcgacctgg
ggcggcatccccatcttcaacagcctcggcaacttcaacagcatgccgcgctccttcaac
aacggcgcgcgctggagcggctggggccagtacacgcgcaccggcttctccacgctggag
caccagttcggcaacggctgggtcgccaaggtccagtacaaccaccagatcaacggctac
gacgcgctcctgggcgccgcggccggcggcaacccgaacccgctggacggctcgggcacc
tcgatgtggctcggcaagtacgtgggccggaccaccagcgatgcgctcgacgcctacgcg
agcggcccgttcaagctgctcggccgcgagcacgaactggtggtgggcgcgagcatcgcg
cggcggcgctggaagaacgacggctacaacttccccggctaccagaccaacgtgtcgggc
tactacggctggaccggccaggtgccgttccccgtctcctcggccacgcccgacttcagc
gacaacgaggtcacgcgcgagcgcggcctgtacgcggccacgcggctgaacctcagcgac
cggctgaagctgatcgcgggcgcccgggtgtcgagctacaggaacaaggacatcgacagg
tccggcgaagtggcgccctatgccggcctcatcttcgacctgacgccgcaactctcggcc
tacggcagctacaccaccatcttcatgccgcagtccagccaggacgtgaacggccgcacg
ctcgatccgcaggacggcaagaaccaggaggtgggcctgaagggcagcttcctggacggc
aagctcaacgccagcctggcctatttccacctcgagcagaacaactaccccgaggccacc
ggcgggctcacgccccggggcgggcaggcctaccgcgcgatccagggcgtggtcgccaag
ggcgtggaggcggaggtctcgggcgagctggcgccgggctggcagctgcatgcgggcttc
acccacaaggtcgcgaagcaggaccgcaagaaggtctcgacgctggagcccgaagaccag
ttcagcctctacaccacctaccgcctccgcggcgcgctgcagggctggacgctgggcggc
ggcgcgcgctggcagagcaagtcgtggggcgatgcgtcgaatccggtgctgggcaccacc
accttcaccaccgacgcctactggctgttcgacctgatggcgcgctacgaattcagcccg
cgcctgtcggccacgctgcgcgtgaacaatgcgctcgacaagaagtacatgacggtcttc
agctggtacagcacctacacctggggtgagccgcgcagcgtgaacgtgaacctggtctac
aagttctga
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