Variovorax paradoxus EPS: Varpa_0320
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Entry
Varpa_0320 CDS
T01392
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_0320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_0320
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Varpa_0320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ADU34542
UniProt:
E6V2B1
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All DBs
Position
complement(336237..337097)
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AA seq
286 aa
AA seq
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MSGIRNKAAPWWLSGPALLLFTALLLVPLLLTAVLSFNVYDPATGPKAGEFTLAHYAHVF
TDSYYHGIFWRTFWISALVTLICVVIGAPEAYVLSRMRNPWRSILLLVVLAPLLVSVVVR
AFGWSMLLGPEGAVNSLLGLVGIGPVKMLYTEIAVIVALVHVMLPFMVIPVWTSLQKLDA
GVENAALSLKASPFTTLRRIVLPQVMPGILSGSLIVFGLAASSFAIPGLLGGRRLKMVAT
VVYDEYLSELNWPLGAAIALTLLAANLIVMLSYNRLVEGRYKKALG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcatccgaaacaaggccgcaccgtggtggctctcgggccccgccctgctgctc
ttcaccgcactgctgctggtgccgctgctgctcaccgcggtgctgtcgttcaacgtatac
gacccggccaccgggccgaaggccggcgaattcacgctggcgcactacgcgcatgtgttc
accgactcgtactaccacggcatcttctggcgcaccttctggatctcggcgctggtcacg
ctgatctgcgtggtcatcggcgcacccgaggcctatgtgctcagccgcatgcgcaacccg
tggcgctcgatcctgctcttggtcgtgctcgcgccgctgctggtgtcggtggtggtgcgc
gccttcggctggagcatgctgctcgggcccgagggcgcggtcaattcgctgctgggcctc
gtgggtatcgggccggtgaagatgctctacaccgagatcgcggtgatcgtcgcgctggtg
cacgtgatgctgccgttcatggtgatcccggtgtggacctcgctgcagaagctggatgcg
ggcgtggagaacgcggcgctctcgctcaaggcctcgccattcaccacgctgcggcgcatc
gtgctgccgcaagtgatgcccggcatcctttcgggcagcctgatcgtcttcggcctcgcc
gcgagttcgttcgcgattccggggctgctcggcgggcgccgcctgaagatggtcgcgacg
gtggtgtacgacgagtacctgagcgagctgaactggcccctcggcgcagcgatcgcactc
acgctgctcgccgcgaacctcatcgtgatgctgagctacaaccgcctcgtcgaaggccgc
tacaagaaagcgctgggctga
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