Variovorax paradoxus EPS: Varpa_0346
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Entry
Varpa_0346 CDS
T01392
Name
(GenBank) protein of unknown function DUF112 transmembrane
KO
K07793
putative tricarboxylic transport membrane protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Varpa_0346
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_0346
Transporters [BR:
vpe02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Varpa_0346
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TctA
Motif
Other DBs
NCBI-ProteinID:
ADU34568
UniProt:
E6V2D7
LinkDB
All DBs
Position
365174..366685
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AA seq
503 aa
AA seq
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MDLIHNLSIGFGVAFTFTNLLYCLLGCILGTLIGVLPGIGPVATIAMLLPATYALPPVSA
LIMLAGIYYGAQYGGSTTAILVNLPGESSSVVTCIDGYQMARQGRAGPALAAAGLGSFFA
GCVGTLILAAFAPPLTELAFKFGPAEYFSLMTLGLIGAVVLASGSLLKAVAMIVLGLLLG
IVGTDVNSGVARFSFDIPELTDGIGFVVIAMGVFGYGEIIGNLSQPDDEREVFTHKVKGL
WPTKDDFKRMTPAVLRGTALGSALGILPGGGALLAAFAAYALEKKIKMRPGEVPFGKGNI
RGVASPESANNAGAQTSFIPLLTLGIPPNAVMALMVGAMTIHNIQPGPQVMTSNPELFWG
LIASMWIGNAMLIILNLPLIGMWIKLLTVPYKFLFPAIVLFCAIGVYSTNNNTFDVWMVA
IFGFIGYLFLKLKTEPAPLLLGFILGPMMEENLRRALLLSRGAWSVFVTRPLSAGLLVAA
AALLCIVLLPSIKAKREEAFVEE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggacctgatccacaacctttccatcggtttcggcgttgccttcaccttcaccaacctg
ctgtattgccttttgggctgcatcctgggcacgctgatcggcgtgctgccgggcatcggc
ccggtcgcgaccatcgcgatgctgctgcccgcgacgtacgcgctgccgcccgtgtcggcg
ctgatcatgctggccggcatctactacggcgcgcagtacggcggctcgacgacggccatt
ctggtgaacctgcccggggagtcgtcctcggtggtcacctgcatcgacggctaccagatg
gcaaggcagggccgcgcaggccccgcgctcgcggctgcgggcctgggctcgttcttcgcg
gggtgcgtcggcacgctgatcctggctgccttcgctccgccgctgaccgagttggccttc
aagttcggcccggccgagtacttctcgctgatgacgctgggcctgatcggcgccgtggtg
ctggcctcgggctcgctcctgaaggccgtggccatgatcgtgctgggcctcttgctcggc
atcgtgggcaccgacgtcaactcgggtgtcgcgcgcttcagcttcgacattcccgagctc
accgacggcatcggcttcgtggtgatcgccatgggcgtgttcggctacggcgaaatcatc
ggcaacctctcgcagcccgacgacgagcgcgaagtcttcacgcacaaggtcaagggcctg
tggcccaccaaggacgacttcaagcgcatgacgcccgcggtgctgcgcggcacggcgctg
ggctcggccctgggcatcctgcccggcggcggtgcgttgctggcggccttcgcggcctac
gcgctggagaagaagatcaagatgcgccccggcgaagtgcccttcggcaagggcaacatc
cgcggcgtggcatcgcccgaatcggccaacaacgccggcgcacagacctccttcatcccg
ctgctgacgctgggcattccgcccaacgcggtgatggcgctgatggtgggcgcgatgacg
atccacaacatccagcccggcccgcaggtgatgaccagcaaccccgagctcttctggggc
ctgatcgcctcgatgtggatcggcaacgcgatgctgatcatcctgaacctgccgctgatc
ggcatgtggatcaagctgctgaccgtgccctacaagttcctgttccccgccatcgtgctg
ttctgcgcgatcggcgtgtactcgaccaacaacaacaccttcgacgtgtggatggtcgcg
atcttcgggttcatcggctacctgttcctgaagctcaagaccgagccggcgccgctgctg
ctgggcttcatcctcgggccgatgatggaagaaaacctgcggcgcgcgctgctgctgtcg
cgtggtgcgtggagcgtgttcgtcacgcggccgctgtcggccgggctgctggtggctgcg
gcggcgctgctgtgcatcgtgctgctgccgtcgatcaaggcgaagcgcgaagaggctttt
gtcgaggaatag
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