Variovorax paradoxus EPS: Varpa_0358
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Entry
Varpa_0358 CDS
T01392
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
vpe02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_0358
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Varpa_0358
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_0358
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Varpa_0358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
SBP_bac_11
Peripla_BP_3
Glyco_hydro_3_C
Tla3_C
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
ADU34580
UniProt:
E6V2E9
LinkDB
All DBs
Position
complement(379935..380855)
Genome browser
AA seq
306 aa
AA seq
DB search
MKNLLKTTALTAALVCAASAAQAQAPKQPLRIGMTFQELNNPYFVTMKQALEEAAASIGA
TVVTTDARHDVAKQIGDVEDMIQKKVDILLLNPTDSTGVQSAVRSAKKAGLVVVAVDANA
QGPVDSFVGSKNTDAGRLACEYLAKSIGEKGDVAILDGIPVVPILERVKGCREALAKYPG
IKVVSTQNGKQERATALTVTENILQANKDLKGIFSVNDGGSMGALAAIDASGKDVKLASV
DGAPEAIKAMQKPGSKFIATTAQYPRDQIRLAIGIALAKKWGANVPAAVPVDVKLIDAEG
AKTFTW
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaccttctcaaaaccaccgccctcaccgccgcactggtctgcgcagcatctgcc
gcccaggcgcaagcgcccaagcagccgctgcgcatcggcatgaccttccaggaactgaac
aacccctacttcgtgacgatgaagcaggcgctggaagaagccgcggccagcatcggcgcc
accgttgtcaccaccgacgcgcggcacgacgtggccaagcagatcggcgacgtggaagac
atgatccagaagaaggtcgacatcctcctgctgaacccgaccgactccaccggcgtgcaa
tcggcggtgcgctcggccaagaaggcgggcctcgtcgtggtggctgtcgatgcgaatgcg
cagggcccggtcgactccttcgttggctccaagaacaccgacgccgggcgcctcgcctgc
gaatacctcgccaagagcatcggcgaaaaaggcgacgtcgcgatcctcgacggcatcccc
gtcgtgccgatcctggagcgggtgaagggctgccgcgaagcgctcgccaagtaccccggt
atcaaggtcgtgagcacgcagaacggcaagcaggagcgagccaccgcgctcaccgtgacc
gagaacatcctgcaggccaacaaggacctgaagggcatcttcagcgtgaacgacggcggc
tcgatgggcgcgctcgcggccatcgacgcgagcggcaaggacgtgaagctcgccagcgtg
gacggcgcacccgaagccatcaaggcgatgcagaagccgggctccaagttcatcgccacc
accgcccagtacccgcgcgaccagatccgcctggccatcggcatcgcgctcgccaagaag
tggggcgccaacgtgccggccgccgtgccagtggatgtgaagctgatcgacgccgaaggc
gcgaagaccttcacctggtaa
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