Variovorax paradoxus EPS: Varpa_0385
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Entry
Varpa_0385 CDS
T01392
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_0385
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_0385
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_0385
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Varpa_0385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
HTH_AT3G52170
Motif
Other DBs
NCBI-ProteinID:
ADU34607
UniProt:
E6V3B7
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All DBs
Position
complement(406134..407339)
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AA seq
401 aa
AA seq
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MSHLSPKSPALPRTLVSLLLCGAALGTAASAMAAPVKVGLALDISGPFAALGAEARDGFA
LGIKQLNGKLGGQDVEFVQADMAGSPDQAKQLVDRMIQRDKIDIFSGPIGSNVALAVGPT
LFNAKVPYLSANAGPSQFAGAQCNAYFFGTAYQNDQFHEAAGKFAQDRGFKKTVLIAPNY
PAGKDALGGFKRQFKGQVADELYTKLGQIDYAAELAQLRAAKPDSIYFFLPGAMGINFIK
QFVGAGLSKDITLVTSGFSADEDVIGAVGEPMLGLFNTSHWAHDLDNPANKAFVAAFRKE
YNGRYPSVYAAQAYDAILAMDAAVKQSGGNAQNREAVVAALKKANYASTRGAFKYANNHY
PIENFYLRVIGKDAQGKVTNKLINTVLTNYGDSYADKCPLK
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgagccacctgtccccgaagtcgcccgcgctgccgcgcaccctcgtctcgttgctgctc
tgcggcgcagcccttggcaccgcggcgtcggccatggccgcccccgtgaaggtgggtttg
gccctcgacatttcggggcctttcgcagcgttgggcgccgaggcgcgcgacggtttcgct
ctcggcatcaagcaactgaacggcaagctcggcggacaggacgtcgaattcgtgcaggcc
gacatggccggcagccccgaccaggccaagcagctggtcgaccgcatgatccagcgcgac
aagatcgacatcttcagcggccccatcggctccaacgtggcgctggccgtgggccccacg
ctcttcaacgccaaggtgccgtacctctcggccaacgccggcccgagccagttcgcgggt
gcgcaatgcaatgcgtatttcttcggcaccgcctaccagaacgaccagttccacgaggcc
gccggcaagttcgcgcaggaccgcggcttcaagaaaacggtgctcatcgcccccaactac
cccgccggcaaggacgcactgggcggcttcaagcgccagttcaagggccaggtggccgac
gagctctacaccaagctcggccagatcgactacgccgccgaactcgcgcaactgcgcgcg
gccaagcccgactcgatctacttcttcctgcccggcgcgatgggcatcaacttcatcaag
cagttcgtgggcgcgggtctgtcgaaagacatcacgctcgtgaccagcggcttctcggcc
gatgaagatgtgatcggcgccgtcggcgagccgatgctcggcctgttcaacacctcgcac
tgggcgcacgacctggacaaccccgccaacaaggcgttcgtggccgcgttccgcaaggaa
tacaacggccgctacccgtcggtgtacgcggcgcaggcctatgacgcgatcctcgcgatg
gacgcggccgtgaagcaatcgggcggcaacgcgcagaaccgcgaagcagtggtcgcagcg
ctgaagaaggccaactacgcctccacgcgcggcgccttcaagtacgcgaacaaccactac
cccatcgagaacttctacctgcgcgtgatcggcaaggatgcgcagggcaaggtcacgaac
aagctgatcaacaccgtgctgaccaactacggcgacagctacgccgacaagtgcccgctg
aagtaa
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