KEGG   Variovorax paradoxus EPS: Varpa_0398
Entry
Varpa_0398        CDS       T01392                                 
Name
(GenBank) single-strand binding protein
  KO
K03111  single-strand DNA-binding protein
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe03030  DNA replication
vpe03430  Mismatch repair
vpe03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Varpa_0398
   03430 Mismatch repair
    Varpa_0398
   03440 Homologous recombination
    Varpa_0398
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vpe03032]
    Varpa_0398
   03400 DNA repair and recombination proteins [BR:vpe03400]
    Varpa_0398
   03029 Mitochondrial biogenesis [BR:vpe03029]
    Varpa_0398
DNA replication proteins [BR:vpe03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Varpa_0398
DNA repair and recombination proteins [BR:vpe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     Varpa_0398
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    Varpa_0398
Mitochondrial biogenesis [BR:vpe03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    Varpa_0398
SSDB
Motif
Pfam: SSB
Other DBs
NCBI-ProteinID: ADU34620
UniProt: E6V3D0
LinkDB
Position
426679..427371
AA seq 230 aa
MAASLVGAFQEPGGGAPPAGIGHNPRFSFSSSFIYLSGAVHMASVNKVIVVGNLGRDPEM
RTFPSGDQVANVTVATTDRWKDKQSGEMREATEWHRIVFNGRLAEIAGQYLRKGSQVYVE
GSLRTRKWTDKDGIEKYTTEIRADQMQMLGSRQGQGGPSGGPEDDGGYSQGGGGGGYSQG
GNGGGGGGGGGGGYAPRAPAAAPRAPSAAPRQAPAKSSTGFDDMDDDIPF
NT seq 693 nt   +upstreamnt  +downstreamnt
atggctgcttcgctggtcggcgcgttccaggagcccggcggtggcgccccgccggccggc
atcgggcacaatccccggttctctttctcctcctccttcatctacttatcaggggcagtg
catatggcatcggtcaataaagtcatcgtcgtcggcaatctggggcgcgaccccgaaatg
cgtaccttcccgagcggcgaccaggtcgcaaacgtcacagtggccaccaccgatcgctgg
aaagacaagcaaagcggcgaaatgcgcgaagccaccgaatggcaccgcatcgtcttcaac
ggccgcctggccgaaatcgccggccagtacctgcgcaagggctcgcaggtgtatgtcgaa
ggctcgctgcgcacgcgcaagtggaccgacaaggacggcatcgagaaatacaccaccgaa
atccgcgccgaccagatgcagatgctgggcagccgccagggccagggcggcccgtcgggc
ggtccggaagacgacggcgggtattcgcaaggcggcggcggtggtggctactcgcagggt
ggcaatggcggcggcggcggcggcggtggtggtggtggctacgctccccgcgctccggct
gcggcaccccgggcaccttcggctgctccgcgccaggcaccggccaagtcgtcgacgggc
ttcgacgacatggatgacgacatcccgttctga

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