Variovorax paradoxus EPS: Varpa_0398
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Entry
Varpa_0398 CDS
T01392
Name
(GenBank) single-strand binding protein
KO
K03111
single-strand DNA-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe03030
DNA replication
vpe03430
Mismatch repair
vpe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Varpa_0398
03430 Mismatch repair
Varpa_0398
03440 Homologous recombination
Varpa_0398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpe03032
]
Varpa_0398
03400 DNA repair and recombination proteins [BR:
vpe03400
]
Varpa_0398
03029 Mitochondrial biogenesis [BR:
vpe03029
]
Varpa_0398
DNA replication proteins [BR:
vpe03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Varpa_0398
DNA repair and recombination proteins [BR:
vpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Varpa_0398
TLS (translesion DNA synthesis) factors
Other SOS response factors
Varpa_0398
Mitochondrial biogenesis [BR:
vpe03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
Varpa_0398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
Motif
Other DBs
NCBI-ProteinID:
ADU34620
UniProt:
E6V3D0
LinkDB
All DBs
Position
426679..427371
Genome browser
AA seq
230 aa
AA seq
DB search
MAASLVGAFQEPGGGAPPAGIGHNPRFSFSSSFIYLSGAVHMASVNKVIVVGNLGRDPEM
RTFPSGDQVANVTVATTDRWKDKQSGEMREATEWHRIVFNGRLAEIAGQYLRKGSQVYVE
GSLRTRKWTDKDGIEKYTTEIRADQMQMLGSRQGQGGPSGGPEDDGGYSQGGGGGGYSQG
GNGGGGGGGGGGGYAPRAPAAAPRAPSAAPRQAPAKSSTGFDDMDDDIPF
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcgctggtcggcgcgttccaggagcccggcggtggcgccccgccggccggc
atcgggcacaatccccggttctctttctcctcctccttcatctacttatcaggggcagtg
catatggcatcggtcaataaagtcatcgtcgtcggcaatctggggcgcgaccccgaaatg
cgtaccttcccgagcggcgaccaggtcgcaaacgtcacagtggccaccaccgatcgctgg
aaagacaagcaaagcggcgaaatgcgcgaagccaccgaatggcaccgcatcgtcttcaac
ggccgcctggccgaaatcgccggccagtacctgcgcaagggctcgcaggtgtatgtcgaa
ggctcgctgcgcacgcgcaagtggaccgacaaggacggcatcgagaaatacaccaccgaa
atccgcgccgaccagatgcagatgctgggcagccgccagggccagggcggcccgtcgggc
ggtccggaagacgacggcgggtattcgcaaggcggcggcggtggtggctactcgcagggt
ggcaatggcggcggcggcggcggcggtggtggtggtggctacgctccccgcgctccggct
gcggcaccccgggcaccttcggctgctccgcgccaggcaccggccaagtcgtcgacgggc
ttcgacgacatggatgacgacatcccgttctga
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