Variovorax paradoxus EPS: Varpa_0405
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Entry
Varpa_0405 CDS
T01392
Name
(GenBank) BioY protein
KO
K03523
biotin transport system substrate-specific component
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_0405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_0405
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Biotin transporter
Varpa_0405
Energy-coupling factor transporter
Varpa_0405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BioY
ECF-ribofla_trS
Thia_YuaJ
DUF5455
Motif
Other DBs
NCBI-ProteinID:
ADU34627
UniProt:
E6V3D7
LinkDB
All DBs
Position
433064..433642
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AA seq
192 aa
AA seq
DB search
MTTTGSITSSRSLSYIALFAALMAVFGLIPKVDLPFGVPITLQSLGVMLAGCLLGPRRGF
FAIALFLLAVALGLPLLPGGRGGLAVFVAPAGGFLFGWMFGAFACGLLMRRMAGATGKGL
LAAAFLSSVVGGIVVVYAFGIVGLSLIAHMSLTQAALAMLVFIPGDLIKCGICAMLVQTV
MRGMPSWRLDRD
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaccggctccatcacctcgtcccgttcgctctcgtacatcgcgctgttcgcc
gcgctgatggcggtgttcggcctgattcccaaggtcgacctgccgttcggcgtgccgatc
acgctgcagtcgctgggcgtgatgctggccggctgcctgctcgggcctcggcgcggcttc
ttcgcgattgcgctgttcctgctggcggtggcgctcgggctgccgctgctgccgggcggg
cgcggcgggctggcggtgttcgtcgcgccggccggcggcttcctgttcggctggatgttc
ggcgcctttgcttgcgggctgctgatgcgccgcatggccggcgcgaccggcaaggggctg
ctggccgcggcgttcctgtcgtcggtggtcggcgggatcgtcgtggtctatgccttcggc
atcgtcgggctctcgctgatcgcccacatgtcgctcacgcaggcggcgctggcgatgctg
gtgttcattcccggcgacctcatcaagtgcggcatctgcgcgatgctcgtgcagacggtg
atgcgcggcatgccgagctggcggctcgaccgcgactga
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