Variovorax paradoxus EPS: Varpa_0423
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Entry
Varpa_0423 CDS
T01392
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATPase subunit
KO
K12371
dipeptide transport system ATP-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_0423
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_0423
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
Varpa_0423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
DO-GTPase2
AAA_29
FtsK_SpoIIIE
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
ADU34645
UniProt:
E6V3F5
LinkDB
All DBs
Position
451392..452420
Genome browser
AA seq
342 aa
AA seq
DB search
MPLLDIKDLHVEFPTQGGVLHAVDGVSLTLEEGEVLGIVGESGSGKSVTMMALMGLVGFP
GRVRAEHMRFAGKDLLGISDKARRSLVGKEVAMIFQEPTTSLNPCFTIGFQLMETLRLHL
NLDKRTAKKRATELLEQVGIPAASSRLASYPHQLSGGMNQRVMIAMAIACNPRLLIADEP
TTALDVTIQAQILDLLRDLQKERGMALVLITHNMGVVSEMAQRIAVMYAGQVMEHQRVDR
LFASPQHPYTEALLAALPERAAPEGRLATISGVVPGVHDRPLGCLFAPRCSYVTTRACNV
RPALREWQGAEVRCHYPLGEPGRIVAIEQDRPQQVPAAEVLQ
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgctggacatcaaagatctgcacgtggaatttcccacgcagggtggcgtgctg
cacgccgtcgatggcgtgagcctcacgctcgaagaaggcgaggtgctcggcatcgtcggc
gaatcgggctcgggcaaaagcgtcaccatgatggcgctcatgggcctggtcggcttcccc
ggccgcgtgcgcgcggagcacatgcgcttcgcgggaaaagacctgctcggcatctccgac
aaggctcgccgttcgctggtcggcaaggaggtcgcgatgatcttccaggagccgaccacc
agcctcaacccctgcttcaccatcggcttccagctcatggaaacgctgcggctgcacctg
aacctcgacaagcgcaccgcgaagaagcgcgcgaccgaactgctggagcaggtcggcatt
cccgccgcgtcgtcgcgcctcgcaagctacccgcaccagctctcgggcggcatgaaccag
cgcgtgatgatcgcaatggcgatcgcctgcaacccgcgcctgctgatcgccgacgagccg
accaccgcgctcgacgtgacgatccaggcgcagatcctcgacctgctgcgcgacctgcag
aaggagcgcggcatggcgctggtgctcatcacgcacaacatgggcgtggtgagcgagatg
gcgcagcgcatcgccgtcatgtatgcgggccaggtgatggagcaccagcgcgtcgaccgg
ctcttcgcatcgccgcagcacccctacaccgaagcactgctcgcggcattgcccgagcga
gcggcgcccgaaggacggcttgccaccatcagcggcgtggtgcccggcgtgcacgaccgg
cctttgggctgcctgttcgcgccgcgctgcagctatgtcaccacgcgcgcctgcaacgtg
cgccccgcattgcgcgagtggcagggcgcggaggtgcgctgccactatccgctcggcgaa
ccgggtcgcatcgtggccatcgagcaagaccggccgcagcaggtgcccgcggcggaggtg
ctgcaatga
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