Variovorax paradoxus EPS: Varpa_0456
Help
Entry
Varpa_0456 CDS
T01392
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_0456
Transporters [BR:
vpe02000
]
Other transporters
Pores ion channels [TC:
1
]
Varpa_0456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ADU34678
UniProt:
E6V4D2
LinkDB
All DBs
Position
complement(493592..495784)
Genome browser
AA seq
730 aa
AA seq
DB search
MAASLLALHALGAMAQTPAAEPAASSGTLATVNVEASADASAEGLTKPYAGGQVARGGRV
GILGNQDMMSTPFSSTNYTNELIQDQQAKSVADVLLNDPSVRQARGFGNFQELYVVRGFP
VYSDDVAYNGLYGMLPRQYIASEFFERVEVFRGANSFLNGAAPGGSGIGGAINLLPKRAP
NEPLTRVGFGVQSGGQGFVNLDLARRFGRDDSLGVRVNAVRREGGTGVFKESQQLSAFGV
GLDWHSRNVRLSADFGYQDYDLKDGRPSLTPSSTLPIPRVPDAKSNFAQPWTYSKEKDKF
ATFRGEVDITDNITAWAAGGVRRSDEDNVLSNPALVNSFGNTSNTRFSNTRKDRIGTAEI
GVRGNFTTGPVKHTVVASATTYSNDRDNAYAISSGSVRNNIYAPFFSPYPVANGTGGFVG
NRLEDPRLTDKIDTSSVAVADTMSFMEDRLLVTLGARRQTIKQTSFAYNTIKETSAYDKS
KTTPVAGVVFKITPTVSAYANYIEALVQGKVAPATANNRPVANGGEVFAPYQAKQKEIGV
KYDGGSLGASAAFFTIDQPVYQYADEAAGQVYGLYGKQRNQGLEFSVFGEPTKGLRLLGG
LTLLDAKQKNTQGGATDGLTAIGVAKQQANLSAEWDVPGVRNLSLNARLLYTSKQYANAA
NTQQIPGWTRFDIGARYLVDLGNGRALTLRARIDNLFNKSYWASVGGTQGSNYLTLGAPR
TFAVSGTIDF
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
gtggcggcttcgcttcttgccctccacgctctcggcgccatggcgcagacacccgctgcg
gaaccggctgcatcgagcggcaccctggccacggtcaacgtcgaagccagcgccgacgcc
tcggccgaaggcctgaccaagccctatgccggcggccaggtggcgcgcggcgggcgggtc
gggattctgggcaaccaggacatgatgagcacgccgttctcgagcaccaactacaccaac
gaactgatccaggaccagcaggccaagagcgtcgccgacgtgctgctcaacgatccgtcg
gtgcgccaggcgcgcggcttcggcaacttccaggagctctacgtggtgcggggcttcccc
gtgtactccgacgacgtggcgtacaacggcctctacggcatgctgccgcgccagtacatc
gcctccgaattcttcgagcgcgtggaagtgttccgcggcgccaactccttcctgaacggt
gccgcgcccggcggcagcggcatcggcggcgcgatcaacctgttgcccaagcgcgcgccc
aacgagccgctcacccgtgtcggctttggcgtgcagagcggtggccagggcttcgtgaat
ctcgacctggcacgccgcttcggccgcgacgacagcctgggcgttcgcgtgaacgccgtg
cgccgcgaaggcggcacgggtgtcttcaaggaaagccagcaactgagcgccttcggcgtc
ggcctcgactggcacagccgcaatgtgcgcctctcggccgacttcggctaccaagactac
gacctgaaggacggccgcccgagcctcacgccctcctcgacgttgccgatcccgcgcgtg
cccgacgccaagagcaacttcgcccagccctggacctactccaaggaaaaggacaagttc
gccaccttccgcggcgaagtcgacatcaccgacaacatcacggcctgggccgccggcggc
gtgcgccgcagcgacgaagacaacgtgctgtcgaacccggccctcgtcaactccttcggc
aacaccagcaacacgcgcttcagcaacacccgcaaggaccgcatcggcaccgccgagatc
ggcgtgcgcggcaacttcaccaccggcccggtgaagcacacggtcgtggcctcggccacc
acgtacagcaacgaccgcgacaacgcctatgcgatctcttcgggcagcgtgcgcaacaac
atctacgcgcccttcttctcgccctaccccgtcgccaacgggaccggtggcttcgtgggc
aaccggctggaagacccgcgcctgaccgacaagatcgacacctcgagtgtcgccgtcgcc
gacaccatgtccttcatggaagaccgcctgctggtcacgctcggcgcacgccgccagacc
atcaagcagaccagcttcgcctacaacacgatcaaggaaacgagcgcctacgacaagagc
aagaccacgccggtggccggcgtcgtgttcaagatcacgccgaccgtgtcggcctacgcc
aactacatcgaagccctggtccagggcaaggtggcccccgccacggcaaacaatcgcccg
gtcgccaatggcggcgaagtctttgcgccctaccaggccaagcaaaaggaaatcggcgtc
aagtacgacggcggttcgctgggcgcgagcgccgcgttcttcacgatcgaccagcccgtc
taccaatacgcggacgaggccgcgggccaggtttacggcctgtacggcaagcagcgcaac
cagggcctcgagttctcggtgttcggcgaacccacgaagggcctgcgcctgctcggcggc
ctgacgctgctggacgccaagcagaagaacacgcaaggtggcgccaccgacggcctgacc
gccatcggcgtggccaagcagcaggccaacctcagtgccgagtgggacgtgccgggcgtg
cgcaacctttcgctgaatgcgcgcctcctttacacctccaagcagtacgccaacgccgcc
aacacgcagcagatcccgggctggacgcgcttcgatatcggcgcacgctacttggtggac
ctgggcaacggccgagcgctcacgctgcgcgcgcgcatcgacaacctgttcaacaagtcg
tactgggcttcggtaggtggcacgcagggctccaactatctgacgctgggcgcaccgcgc
accttcgcggtgagcggcaccatcgacttctga
DBGET
integrated database retrieval system
