Variovorax paradoxus EPS: Varpa_0479
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Entry
Varpa_0479 CDS
T01392
Name
(GenBank) arginyl-tRNA synthetase
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Varpa_0479
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vpe01007
]
Varpa_0479
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpe03016
]
Varpa_0479
03029 Mitochondrial biogenesis [BR:
vpe03029
]
Varpa_0479
Enzymes [BR:
vpe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
Varpa_0479
Amino acid related enzymes [BR:
vpe01007
]
Aminoacyl-tRNA synthetase
Class I (G)
Varpa_0479
Transfer RNA biogenesis [BR:
vpe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Varpa_0479
Prokaryotic type
Other AARSs
Varpa_0479
Mitochondrial biogenesis [BR:
vpe03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Varpa_0479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DALR_1
tRNA-synt_1d
Arg_tRNA_synt_N
tRNA-synt_1f
tRNA-synt_1
tRNA-synt_1g
KorB_C
Phage_base_V
Motif
Other DBs
NCBI-ProteinID:
ADU34701
UniProt:
E6V4F5
LinkDB
All DBs
Position
517949..519634
Genome browser
AA seq
561 aa
AA seq
DB search
MLLVKQELLAALANTLESLSPGAGAKAAFESPKVAAHGDFASTAAMQLAKPLAKKPRELA
EQLSAALLATPAFGQWVEAIEIAGPGFLNIRLKTAAKQQIVREVLAAGNTFGQQPATGEK
VLVEFVSANPTGPLHVGHGRQAALGDAICNLRASQGDSVWREFYYNDAGVQIQTLANSTQ
LRARGFKPGDPEWPSGEKAPAYNGDYIADIAEDFKAKKTVKSDDREYTASGDIDDIDSIR
EFAVAYLRREQDLDLQAFRVRFDNYYLESSLYTSGRVEAAVGKLVAAGKTYEEDGALWLK
STDYGDDKDRVMKKKDGTYTYFVPDVAYHIAKWERGFHKVVNIQGTDHHGTIARVRAGLQ
AAGEGIPEGYPDYVLHTMVRVMKGGEEVKISKRAGSYVTLRDLIEWTSTDAVRFFLLSRK
PDTEYTFDVDLAVTKNNDNPVYYVQYAHARICSVLAGWGGDAATLKDVDLSPLKSPAAQA
LMLLLAKYPAMLTAASKDFAPHDVTFYLRELAASYHSYYDAERILVDDEKVKLARLALVA
ATAQVLHNGLAILGVSAPNKM
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgctattggtcaaacaggagctgctcgcggcgctcgcgaacacgctcgaatccctctcc
cccggcgctggcgccaaagccgcgttcgaatcgcccaaggtggcggcgcatggcgatttc
gctagcaccgccgccatgcagctcgccaaaccgctcgcgaagaagccccgcgaactggcc
gagcaactgagcgctgcgctgctcgccacccccgctttcggccaatgggtcgaagccatc
gagatcgccggccccggcttcctcaacatccgcctgaagaccgccgccaagcagcagatc
gtgcgcgaagtgctggccgcaggtaacacttttggccagcagcccgccaccggcgagaag
gtgctggtcgaattcgtctcggccaacccgaccggcccgctgcatgtgggccacggccgc
caggcagcactgggcgacgccatctgcaacctgcgcgcctcgcagggcgacagcgtctgg
cgcgagttctattacaacgacgccggcgtgcagatccagacgctggccaacagcacgcag
ctgcgcgcccgcggcttcaagccgggcgacccggaatggccgagcggcgaaaaggcaccc
gcctacaacggcgactacatcgccgacatcgccgaggacttcaaggccaagaaaaccgtc
aagtcggacgaccgcgaatacaccgcgagcggcgacatcgacgacatcgattccatccgc
gaattcgccgtggcgtacctgcgccgcgaacaggacctggacctgcaggccttccgcgtg
cgcttcgacaactactacctcgagtccagcctctacaccagcggccgcgtcgaagccgcc
gtgggcaagctcgtggccgccggcaagacctacgaggaagacggcgcgctctggctcaag
tcgaccgactacggcgacgacaaagaccgtgtgatgaagaagaaggacggcacgtacacg
tacttcgtgcccgacgtcgcctatcacattgccaagtgggagcggggtttccacaaggtc
gtgaacatccagggcaccgaccaccacggcacgatcgcgcgggtgcgcgccgggctgcag
gcggcgggcgagggcattcccgagggctatcccgactacgtgctgcacacgatggtgcgc
gtgatgaagggcggcgaagaggtcaagatcagcaagcgcgccggcagctacgtgacgctg
cgcgacctgatcgagtggaccagcaccgatgccgtgcgcttcttcctcctgagccgcaag
cccgacaccgaatacaccttcgacgtcgacctcgcggtgaccaagaacaacgacaacccg
gtgtactacgtgcagtacgcgcatgcgcgcatctgctcggtgttggccggctggggcggc
gacgccgccacgctgaaggatgtggacctgtcgccgctcaagagcccggcagcgcaggcg
ctcatgctgcttttggccaagtacccggccatgctcaccgccgcgtcgaaggatttcgcc
ccgcacgacgtcactttctacctgcgcgaattggccgctagttaccacagctattacgac
gccgagcgcattctggtggacgacgaaaaggtcaagctggcccgcctggcgctggtcgcc
gcgaccgcgcaggtgctgcacaatggcctcgcgattctcggcgtcagtgcgccgaacaag
atgtga
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