Variovorax paradoxus EPS: Varpa_0546
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Entry
Varpa_0546 CDS
T01392
Name
(GenBank) integral membrane sensor hybrid histidine kinase
KO
K20975
two-component system, sensor histidine kinase [EC:
2.7.13.3
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Varpa_0546
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vpe01001
]
Varpa_0546
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vpe02022
]
Varpa_0546
Enzymes [BR:
vpe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Varpa_0546
Protein kinases [BR:
vpe01001
]
Histidine kinases
Other
Varpa_0546
Two-component system [BR:
vpe02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
Varpa_0546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
Response_reg
HisKA
HAMP
HATPase_c_2
Acylphosphatase
sCache_4
Motif
Other DBs
NCBI-ProteinID:
ADU34767
UniProt:
E6V5G1
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All DBs
Position
complement(600235..602190)
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AA seq
651 aa
AA seq
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MNAPPPPQGPVPAGDDAVQPRAASALVVRGNLQGDLFRLGVVPCAAVALALTGWFTHNRL
QTLEAQFDAEGEAVARQVAAMSDLSLYAGDVPALQNVANAALRGGQVMRVEISNSAGVYV
TAGPKNESLAQLRMFTSPVTLREASRASAFAPAGSTAAGDTPIGLVQTFRDTTAYARERS
RSLMAGIGIALVALLAAWASVRHMARTVARPLRRVSRTVAALEAGHFDMRCEVVEGGTRG
SHELAVLAHDIDRLAERLQHNRQVSEERVREATAVALQRMAEAEQAALSRARFLAAASHD
LRQPLHAMGLFIDGLLPTASAAQRPAVLRLQESTEFMGVLLDDLLEISRLDAQVLTPTIT
RISLAALFDQLDAQHAAAAIEARVRLRWSDRGLAVRTDAAMLQRIVNNLVANALRHAPEG
GTVLVAARRIASGVRIEVRDNGVGIAPIHQGRIFEEFYQVANTERDRRRGFGLGLAICAR
IATLLGTRITVRSALQAGSTFAFTLPAARAADVVLPEPAPVAPAPLAGLRCLVVDDDPAI
LDGSRALLEQWGCEVECVATGAEAIARMGTGDIHFDAVLCDLQLAGDGDGVDVIEAAKRL
QPDALAVLVSGATGPEVLQRLRHGGVMLLTKPVPPAKLRALLTTRRHAHAA
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccccgccgcccccgcaaggtccggtgcccgccggcgacgacgcggtgcagccc
cgtgccgcgtccgcgctggtcgtgcgcggcaatctgcagggcgacctgttccgcctgggc
gtggtgccgtgcgcggcggtggcgctcgcgctcaccggctggttcacccacaaccggctg
cagacgctcgaagcccagttcgatgccgaaggcgaggccgtggcgcgccaagtggcggcc
atgtccgacctgagcctgtacgcgggcgacgtgccggcgctgcagaacgtggccaatgcg
gcgctgcgcggcggacaggtgatgcgggtggagatcagcaacagcgcgggcgtgtacgtc
acggccgggcccaagaacgaatcgctcgcgcaattgcgcatgttcacctcgccggtcacg
ctgcgcgaggcctcgcgcgccagcgccttcgcgcccgcgggctccaccgcggcgggcgac
acgcccatcggcctggtccagaccttccgggacaccaccgcctatgcgcgcgagcgcagc
cgctcgctcatggcgggcatcggcatcgcgctggtggcgctgctggcggcgtgggcctcg
gtgcgccacatggcgcgcacggtggcgcggccgctgcggcgcgtgtcgcgcaccgtcgcc
gcgctcgaagccggccacttcgacatgcgctgcgaagtggtcgagggcggcacccgcggc
tcgcacgaactggcggtgctcgcgcacgacatcgaccggctcgccgaacgcctgcagcac
aaccgccaggtgagcgaggagcgggtgcgtgaagccaccgccgtcgcgctgcagcgcatg
gccgaagccgagcaggcggcgctttcgcgtgcgcgttttctcgcggccgcgagccacgac
ctgcgccagccgctgcatgcgatgggcctcttcatcgacggcctgctgcccaccgccagc
gcggcgcagcgcccggccgtgctgcggctgcaggagagcaccgagttcatgggcgtgctg
ctggacgacctgctggaaatctcgcggctcgatgcgcaggtgctcacgcccaccatcacg
cgcatctcgctggccgccctcttcgaccaactcgatgcgcaacacgccgccgccgccatc
gaggcgcgcgtgcggctgcgctggagcgaccggggcctggcggtgcgcaccgacgcggcg
atgctgcagcgcatcgtcaacaacctcgtggccaatgcgctgcgccatgcgcccgaaggc
ggcaccgtgctggtggccgcgcggcgcatcgcgtccggcgttcgcattgaagtgcgtgac
aacggcgtgggcatcgcaccgatccaccagggtcggatcttcgaggagttctaccaggtg
gcgaacaccgagcgcgaccgccgccgcggcttcggcctggggctcgcgatttgcgcgcgc
atcgccacgctgctgggcacccgcatcaccgtgcgctcggcgctgcaggccggcagcacc
ttcgccttcaccctgcccgccgcgcgcgccgccgacgtcgtgctgcccgagcccgcaccc
gtcgcacccgcgccgctcgcgggcctgcgctgcctggtggtggacgacgaccccgccatc
ctcgacggcagccgcgcgctgctggagcagtggggctgcgaggtcgaatgcgtggccacc
ggcgccgaggccatcgcgcggatgggcacgggcgacatccatttcgatgcggtgctgtgc
gatctgcaactggccggcgacggcgacggtgtcgacgtgatcgaagcggccaagcgcctg
cagcccgacgcgctcgcggtgctggtgtcgggcgcgacagggcccgaggtgctgcagcgg
ctgcggcatggcggcgtgatgctgctgaccaagccggtgccgccggccaagttgcgcgcg
ctgctcactacgcggcggcacgcacacgcggcctga
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