KEGG   Variovorax paradoxus EPS: Varpa_0562
Entry
Varpa_0562        CDS       T01392                                 
Name
(GenBank) virulence protein SciE type
  KO
K11898  type VI secretion system protein ImpE
Organism
vpe  Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpe02044]
    Varpa_0562
Secretion system [BR:vpe02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   Varpa_0562
SSDB
Motif
Pfam: ImpE TPR_19 TPR_20 ANAPC3
Other DBs
NCBI-ProteinID: ADU34783
UniProt: E6V5H7
LinkDB
Position
624022..624876
AA seq 284 aa
MATSSAELIKSADPVAALKALSDEVRAKPSDSKHRVFMAQLLCVLGQWERALNQLTVAAE
LDALAVPMKQVYGDAVRCEGLRAEVFAGTRTPMIFGQPDEWLALLIESLLRQGRGESELA
EDLRQRAFDGAPAIAGTIDGTPFEWLADADMRLGPVLEAFVNGKYYWIPYARLAHIKIEP
PEDLRDCVWMPAHLQFENGGETLALIPTRYEGSEKSEDGELQLARKTEWRELRPEVWAGT
GQRVLGSDAGEYALMDVREILFNPVASAEAEAAPSQEGTESAGG
NT seq 855 nt   +upstreamnt  +downstreamnt
atggccacctcttccgccgaactcatcaagtccgccgaccccgtggcggcgctcaaggcg
ttgagcgacgaggtgcgcgccaagccctccgacagcaagcaccgcgtgttcatggcgcag
ctgctctgcgtgctggggcagtgggagcgcgcgctcaaccagctcacggtcgcggccgag
ctcgatgcgctcgccgtcccgatgaagcaggtgtacggcgatgccgtgcgctgcgagggc
ctgcgcgccgaggtgttcgccggcacgcgcacgccgatgatcttcggccagcccgacgaa
tggctggcgctgctcatcgagtcgctgctgcggcaggggcgcggcgagtccgagctggcc
gaggacctgcgccagcgcgccttcgacggtgcgcccgccatcgcgggcaccatcgacggc
acgcccttcgagtggctggccgatgccgatatgcgcctgggccccgtgctcgaagccttc
gtcaacggcaagtactactggattccgtatgcgcggctcgcgcacatcaagatcgagccg
cccgaggacctgcgcgactgcgtctggatgcccgcgcacctgcagttcgagaacggcggc
gaaaccctcgcgctcattcccacgcgctacgaaggttccgagaagagcgaagacggcgag
ctgcagctcgcacgcaagaccgagtggcgcgagctccgtcccgaggtgtgggccggcacc
ggccagcgcgtgctcggcagcgatgccggcgagtacgcgctcatggacgtgcgcgagatc
ctcttcaacccggtcgcttccgccgaagcagaagcagcaccttcgcaggaaggcaccgaa
agcgcgggcggctga

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