KEGG   Variovorax paradoxus EPS: Varpa_0568
Entry
Varpa_0568        CDS       T01392                                 
Name
(GenBank) type VI secretion system Vgr family protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Varpa_0568
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpe02044]
    Varpa_0568
Secretion system [BR:vpe02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Varpa_0568
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 Gp5_C
Other DBs
NCBI-ProteinID: ADU34789
UniProt: E6V5I3
LinkDB
Position
632573..635614
AA seq 1013 aa
MADHEFRIETDSPAKDDLMFWRIVGHEALARPSAYELTVLSKNKALDAKDILGRAFDVVI
EFQDKDGGKHERHCQGHAVRFVRAGHVGRHFEYRITLRSWFWLLTKRTNSRILQDKKILE
VLDAVFEDSPIKRFKKTKAGNVIGTHTPRRYCVQHQENDYQFLSRLLEDEGIYYWFDAHD
APGTMHLSDASDLAHEKLPVDGTLRYMPSDASEARHNDISRWISSRQFDTGKQASRDSDF
KAIKKKLGATIDVKDDHELADFEEFEFPGGYFTGDDGENRTKLRGDELNARRDRHWALTT
WPDVTAGRSFKFEGDPDGTRNGDYVIAACTFMASHPGYESVGASMAVTQDVRTAMAEVLR
DDAVNADTLQVLEDLIASTPMLNTSQPGTSAFLITAIPLERAYRPPRLTPRVTMPGPQTA
IVVGPAGDELHVDDHGRVKVHFHWDRYDESNEKSTCWVRVSQPWGGKGWGGYFIPRIGQE
VIVDFLNGDPDRPVIVGRVYNDDQPIPYKSPTQSGFKTRSTPGGGPANYNEIMFEDKKGE
ENINIHAELDMSRSVERDDSTKVDRDQSVTVKRDQTTTVVRDRKLTVENNDTTSIQQFQK
LTVGQNQDNHVVGNQTTHVDADHALLVKGNHTIDVKGKRTDSTGGNEDRFVKGNQTIAVT
GNMSQKAARMTFEAGHIEFKVTGANSINWDGGAAPYTAAFQKYSLLSNTHINMMAVGDIN
QTSLGSNTTVLGANTSGYIGNNTEANLGMAQSTFLGMSTDNAVGLAMSNFLGMQIENTVA
IQIISVAAIGVERKNGDLKEAPFHILKAGAGGGGGSASPRVDKLAAAFSAVSAVWGIYTG
RAGVKATFKQYEDAAVQLREAANDPACESVPGLKGRLERMANVADARLEQGRSLAGSHFG
TDAAIGAGTGAAVVGGVGGIFGPVGTVVGGVVGGAAGAVVGGPLGAVTRAASSDAGDQSD
ALKPLDDGSVPPEPSPANPAPQAPAADTGPNSSQADGPTSEPDGPNSSGSGEP
NT seq 3042 nt   +upstreamnt  +downstreamnt
atggccgaccacgagttccgcatcgagaccgattcacccgccaaggacgacctgatgttc
tggcgcatcgtgggtcacgaggcgctcgcgcgcccctcggcgtacgagctcacggtgctc
tcgaagaacaaggcgctcgatgccaaggacatcctgggccgggcgttcgacgtggtcatc
gagttccaggacaaggacggcggcaagcacgagcggcattgccagggccatgcggtgcgc
ttcgtgcgcgcggggcatgtgggccggcatttcgaataccgcatcacgctgcgctcgtgg
ttctggctgctcaccaagcgcaccaactcgcgcatcctgcaggacaagaagatcctggag
gtgctcgatgccgtgttcgaagacagcccgatcaagcgcttcaagaagaccaaggccggc
aacgtcatcggcacccacacgccccggcgctactgcgtgcagcaccaggagaacgactac
cagttcctctcgcgcctgctggaggacgagggcatctactactggttcgatgcgcacgat
gcgcccggcaccatgcacctgtcggatgcgagcgaccttgcgcacgagaagctgccggtg
gacggcacgctgcgctacatgcccagcgatgcgagcgaggcgcggcacaacgatatctcg
cgctggatcagctcgcgccagttcgacaccggcaagcaggcctcgcgcgacagcgacttc
aaggcgatcaagaagaagctgggcgccaccatcgacgtgaaggacgaccatgagctggcc
gacttcgaggagttcgaatttccgggcggctatttcacgggcgacgacggcgagaaccgc
accaagctgcgcggcgacgaactcaacgcgcgccgcgaccgtcactgggcgctgaccacc
tggcccgatgtgacggccgggcgcagcttcaagttcgaaggcgatcccgacggcacgcgc
aacggcgactacgtgatcgcggcctgcaccttcatggcgagccatccgggctacgaaagc
gtcggcgccagcatggccgtgacgcaggacgtgcgcactgcgatggccgaggtgctgcgt
gacgatgcggtgaacgccgacacgctgcaggtgctggaagacctgatcgccagcacgccg
atgctcaacacctcgcagccgggcaccagcgcattcttgatcacggcgatcccgctggag
cgcgcctaccggccgccgcgcctcacgccgcgcgtgaccatgcccgggccgcagaccgcc
atcgtggtcggcccggccggcgacgagctgcacgtggacgaccacggccgcgtgaaggtg
cactttcactgggaccgctacgacgagagcaacgagaagtcgacctgctgggtgcgcgtg
tcgcagccctggggcggcaagggctggggcgggtatttcattccgcgcatcggccaggag
gtgatcgtcgacttcctgaacggcgatccggaccggccggtgatcgtcggccgcgtctac
aacgacgaccagcccattccctacaagtcgcccacgcagagcggcttcaagacccgctcc
acgcccgggggcggtcccgcgaactacaacgagatcatgttcgaggacaagaagggcgag
gagaacatcaacatccacgccgagctggacatgagccgcagcgtggagcgggacgattcg
acgaaggtggaccgcgaccagtcggtgaccgtcaaacgcgaccagaccaccacggtggtg
cgggaccgcaagctgaccgtggagaacaacgacaccacgagcatccagcagttccagaaa
ctcacggtcggccagaaccaggacaaccacgtcgtcggcaaccagaccacccatgtggat
gccgaccacgcactgctcgtcaagggcaatcacacgatcgacgtcaagggcaagcgcacc
gactccacgggcggcaacgaggaccgcttcgtgaagggcaaccagacgatcgcggtgacc
ggcaacatgagccagaaggccgcgcgcatgaccttcgaggccggccacatcgagttcaag
gtgaccggcgccaattcgatcaactgggacggcggcgcggcgccctacaccgcggcgttc
cagaaatacagcctcttgagcaacacgcacatcaacatgatggcggtcggcgacatcaac
cagacatcgctcggctccaacaccaccgtgctcggggccaacaccagcggctacatcggc
aacaacaccgaggccaacctgggcatggcgcagtccaccttcctgggcatgagcaccgac
aacgcggtcggcctggccatgagcaacttcctgggcatgcagatagagaacacggtggcc
atccagatcatctcggtggcggccatcggggtcgagcgcaagaacggcgacctgaaggag
gcgccgttccacatcctcaaggcgggcgccggaggcggtggcggcagcgcctcgccacgg
gtggacaagctggcagccgctttttcggcggtgagcgctgtctggggcatctataccggg
agggccggcgtcaaagccaccttcaagcagtacgaggacgcggccgtgcaactgcgcgag
gcagccaatgatccggcgtgcgagtccgtgccggggctcaagggccggctggagcgcatg
gccaatgtggccgacgcacgcctggaacaggggcgctcgttggctggttcgcacttcggc
accgatgcggccattggcgccggcaccggcgcggcggtggtgggcggggtggggggcatc
ttcggcccggtgggcacagtggtcggcggtgtggtgggcggtgcggctggtgcggtcgtg
ggcggtcccctcggggcggtgacgcgggccgccagcagcgacgcgggcgatcagtcggat
gcgctcaagcctctggacgacggttcggtgccaccggaaccgtcgcccgccaatccggcg
ccccaggcaccggcggccgacaccggcccgaactcctcgcaggccgacgggccgacttcc
gaaccggacggtccgaactcgtccggctccggcgagccctga

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