Variovorax paradoxus EPS: Varpa_0715
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Entry
Varpa_0715 CDS
T01392
Name
(GenBank) TRAP dicarboxylate transporter, DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Varpa_0715
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_0715
Transporters [BR:
vpe02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Varpa_0715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
CitMHS
DcuC
Motif
Other DBs
NCBI-ProteinID:
ADU34933
UniProt:
E6V7L1
LinkDB
All DBs
Position
complement(806112..807392)
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AA seq
426 aa
AA seq
DB search
MTILVFVGSLLLAMAMGIPIAFSLLASGVALMWHLDLFDAQILAQNVIGGADSFPLLAVP
FFMLAGEIMNVGGLSKRIVDFALAVVGHVKGGLGYVTIMAGCLLSALSGSAVADAAALTA
LLLPMMVKAGHDKPRAAGLIAATGVIGPVIPPSIGLVIFGVAANVSISKLFLAAIVPGLL
IGAALWLTWAWLVRREKIVPPPRKSSAEIFATFRKAIWALMLPIIILVGLRMGVFTPTEA
AVVAAVYALFVSTVIYREITWRDLYGIFVSAAKTSAIVMFLIAAAMVSAWLITVADLPSK
IVGLLEPFMGNQILLMIAIMVIVMVVGTAMDMTPTILILTPVLMPVVKAAGIDPVYFGVL
FIINNSIGLVTPPVGTVLNVVAGVGKISMDDVTRGVVPFMIAEFAILFVMVAFPQLVIVP
ARWFGG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcctcgtctttgtcggctccctcctcctggccatggcgatgggcattcccatc
gccttctcgctgctcgcgagcggcgtggcgctcatgtggcacctggacctgttcgatgcg
cagatcctcgcgcagaacgtgatcggcggcgcggacagctttccgctgctggccgtgccc
ttcttcatgctggccggcgagatcatgaacgtgggcggcttgtcgaagcgcatcgtcgac
ttcgcgctcgcggtggtcgggcatgtgaagggcgggctcggctacgtgaccatcatggcc
ggctgcctgctctcggcgctctcgggctcggccgtggccgacgccgccgcgctcaccgca
ttgctgctgccgatgatggtgaaggccggccacgacaagccgcgcgcggccggcctcatc
gcggccacgggcgtgatcgggccggtgattccgccgagcatcggcttggtgatcttcggc
gtggccgccaacgtgtcgatctcgaagctgttcctcgcggccatcgtgccgggcctcctg
atcggcgcggcgctatggctcacctgggcctggctcgtgcggcgcgagaagatcgtgccg
ccgccgcgcaagtcgtcggccgagatcttcgccaccttccgcaaggcgatctgggcgctg
atgctgccgatcatcatcctcgtgggcctgcgcatgggcgtgttcacgccgaccgaggcc
gcggtcgtggccgcggtgtatgcgctcttcgtctcgacagtcatctaccgcgagatcacc
tggcgcgacctctacggcatcttcgtgagcgcggccaagaccagcgcgatcgtgatgttc
ctgatcgccgcggcgatggtgagcgcctggctcattacggtggccgacctgccatcgaag
atcgtcggcctgctggagcccttcatgggcaaccagatcctgctgatgatcgcgatcatg
gtgatcgtgatggtcgtgggcaccgcgatggacatgacgccgaccatcctgatcctcacg
ccggtgctcatgccggtggtgaaggcggcgggcatcgacccggtgtacttcggcgtgctc
ttcatcatcaacaactcgatcggactggtcacgccgccggtgggcacggtgctcaacgtg
gtggcgggcgtcgggaagatatcgatggacgatgtcacgcgcggcgtggtgccgttcatg
atcgcggagttcgcgatcctgttcgtgatggtggcgtttccgcagctggtgatcgtgccg
gcgcggtggttcgggggctga
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