Variovorax paradoxus EPS: Varpa_0758
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Entry
Varpa_0758 CDS
T01392
Name
(GenBank) Pyridoxal-5'-phosphate-dependent protein beta subunit
KO
K01754
threonine dehydratase [EC:
4.3.1.19
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00260
Glycine, serine and threonine metabolism
vpe00290
Valine, leucine and isoleucine biosynthesis
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
vpe01200
Carbon metabolism
vpe01230
Biosynthesis of amino acids
Module
vpe_M00570
Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Varpa_0758
00290 Valine, leucine and isoleucine biosynthesis
Varpa_0758
Enzymes [BR:
vpe01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.19 threonine ammonia-lyase
Varpa_0758
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Gene cluster
GFIT
Motif
Pfam:
PALP
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
ADU34976
UniProt:
E6V8J3
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All DBs
Position
complement(854861..855841)
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AA seq
326 aa
AA seq
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MKFTREEIEAAQRTVHAAMPPTPQYTWPLLSQRLGATLWAKHENHTPVGAFKIRGGLTYF
ETLAREHPEVRHVISATRGNHGQSLGFAARRHGLGATIVVPHGNSLEKNAAMRALGVELV
EHGDDFQAASEHAALLAERDALHRVPSFHRELVRGVSTAYVEFFSALKDAPPDVLFVPIG
LGSGFAGAAVARAHCGVSTKIIGVVSAHATAYRDSFRAGKPVESPVSTRLADGMACRVPV
PESVEVILREADDVITVTDDEVGEAMRILFSDTHNVAEGAGAAALAGALQQQARWRGKTV
GISVSGGNVDSDMFAGVLARSASSTS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
gtgaaattcacccgcgaagagatcgaagccgcgcagcgcaccgtgcatgcggcgatgccg
ccgaccccgcaatacacctggccgctgctgtcgcagcgcctgggcgcgacgctctgggcc
aagcacgagaaccacacgccggtcggcgccttcaagatccgcggcggcctcacctacttc
gagacccttgcgcgcgagcaccccgaagtacgccacgtgatcagcgcgacgcgcggcaac
cacggccagtcgctcggcttcgcggcgcggcggcacggcctcggcgcgaccatcgtggtg
ccgcacggcaactcgctggagaagaacgccgcgatgcgcgcgctcggcgtcgagctggtc
gagcatggcgacgatttccaggcggcgtcggagcacgcggccctgctggccgagcgtgac
gcgctgcaccgcgtgccttcgttccaccgcgagctggtgcgtggcgtgtcgactgcgtat
gtcgagttcttcagcgcgctgaaagatgcgccacccgacgtgctgttcgtgcccattggc
ctcggctccggctttgccggcgcggccgtggcgcgcgcgcattgcggcgtgtcgaccaag
atcatcggcgtggtgtcggcccacgcgacggcgtaccgcgattcctttcgcgcgggcaag
cccgtcgaatcgccggtcagcacacgattggccgacggcatggcctgccgcgtgccggtg
cccgaatcggtcgaggtgatcctgcgcgaagccgacgacgtgatcaccgtcaccgacgac
gaggtgggcgaggcaatgcgcatccttttcagcgacacgcacaacgtggccgaaggcgcc
ggtgccgccgcattggcgggcgcgcttcagcagcaggcgcgctggcgcggcaagacggtg
ggcatcagcgtgagcggcgggaatgtcgattcagacatgttcgccggggtgctcgcgcgc
agcgcttcctcaacttcctga
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