Variovorax paradoxus EPS: Varpa_0792
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Entry
Varpa_0792 CDS
T01392
Name
(GenBank) ABC-2 type transporter
KO
K09690
homopolymeric O-antigen transport system permease protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_0792
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_0792
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Homopolymeric O-antigen
Varpa_0792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC2_membrane_3
Motif
Other DBs
NCBI-ProteinID:
ADU35010
UniProt:
E6V8M7
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All DBs
Position
complement(893850..894653)
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AA seq
267 aa
AA seq
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MSQVHSNLHRSALADWWEGTRRTDIWWTLAWFDIVLRYRRSMLGPLWLTLSMGVMIGGMG
PLYASLFGTHLDKFFPHLALGVIFWGTFSAVVTDACNAFVGSSNYLKQGYFPISLFVWRG
LARNLIQFLHQIVLYIPVAIWAGVTLSWSVLLIIPAFVILIINAHALGLLLGLICTRYRD
VTQIITSLMQMLMFLTPVFWLPENLPGRAKYVLWNPFAQMLDLLRTPLMGGEAHLHSWIG
MGLWTVFCVSLASVLFVKYRRRVVYWL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagtccattccaatctgcatcgaagcgcgctggccgactggtgggaaggcacc
cgccgcaccgatatctggtggacgctcgcctggttcgacatcgtgctgcgctaccgccgc
tccatgctggggccgctgtggctcacgctgagcatgggcgtgatgatcggcggcatgggg
ccgctgtatgcctcgctcttcggcacccacctggacaagttcttcccgcacctggcgctg
ggcgtgatcttctggggcactttctccgcggtggtcaccgatgcctgcaatgcctttgtc
ggatcgtccaactacctgaagcaaggctactttcccatcagcctgttcgtctggcggggc
ctggcgcgcaacctgatccagttcctgcaccagatcgtgctgtacatccccgtggccatc
tgggcgggtgtcacgctgtcgtggtcggtgctcctgatcattcccgccttcgtgatcctc
atcatcaacgcgcacgccctgggcctgttgctgggcctcatctgcacgcgctaccgcgac
gtgacccagatcatcaccagcctcatgcagatgctgatgttcctgacccccgtgttctgg
ctgcccgagaacctcccgggccgcgccaaatacgtgctctggaatccgttcgcgcagatg
ctcgatctgctgcgcacaccactcatgggcggcgaggcgcacctgcacagctggatcggc
atgggcttgtggaccgtgttttgcgtctccctcgcgagcgtcctgttcgtcaaataccgc
cgccgcgtcgtctactggctctga
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