Variovorax paradoxus EPS: Varpa_0805
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Entry
Varpa_0805 CDS
T01392
Name
(GenBank) putative simple sugar transport system substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
vpe02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_0805
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Varpa_0805
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_0805
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Varpa_0805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
ADU35023
UniProt:
E6V8P0
LinkDB
All DBs
Position
complement(908463..909491)
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AA seq
342 aa
AA seq
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MKKIRLSSTALAAALMLGAAALHLPAHAADTKAKKIALSNNFAGNSWRQAMLKSWDKVTK
DAVAKGVVAQAPSFTTSENQATEQAAQIQNMILQGFDAIVINAASPTALNGAVKQACDAG
IVVVSFDGIVTEPCAYRIAVDFKQLGAMQIDYFASRGLKGNLLEVRGLAGVFVDDEIHQG
ITAAVAKRPEYKIVGSVHGNWTQTVAQKEVSAILSTLPQVAAVATQGGDGYGVAQAFKAA
GRPTPVIFMGNRQDELAWWKEQRDANKYQTMSASIAPGASTFAFWVAQQILSGAKVPKEM
KLPISVVTQETLDDAVKKTEVGSVVNVEYSQKEVIDFIAKAK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagatccgactctcatccaccgcactggccgccgcgctcatgctgggcgccgcc
gcactgcaccttccggctcacgcggccgacaccaaggccaagaagatcgcgctgtcgaac
aacttcgcgggcaactcgtggcgccaggccatgctcaagagctgggacaaggtgaccaag
gacgcggtcgccaagggcgtggtggcgcaggcgccgagcttcacgacgtcggagaaccag
gccaccgagcaggccgcgcagatccagaacatgatcctgcagggcttcgatgccatcgtg
atcaacgcggcctcgcccacggcgctcaacggcgcggtgaagcaggcgtgcgacgcgggc
atcgtggtggtgtcgttcgacggcatcgtgaccgagccctgcgcctatcgcatcgccgtg
gacttcaagcaactcggcgcgatgcagatcgactactttgcaagccgcggactcaagggc
aacctgctcgaggtgcgcggcctggccggcgtgttcgtcgacgacgaaatccatcagggc
atcacagcggccgtggccaagcggcccgagtacaagatcgtcggctcggtgcacggcaac
tggacgcagaccgtggcgcagaaggaggtgtcggccatcctctcgacgctgccgcaggtg
gcggcggtcgccacgcaaggcggcgacggctacggcgtggcgcaggccttcaaggccgcg
ggccgcccgacgccggtgatcttcatgggcaaccggcaggacgagctcgcgtggtggaag
gaacagcgcgatgccaacaagtaccagaccatgtcggccagcatcgcaccgggcgcctcg
accttcgcgttctgggtggcgcagcagatcctctcgggcgccaaggtgcccaaggagatg
aagctgccgatcagcgtggtgacgcaagagacgctggacgacgcggtcaagaagaccgaa
gtcggcagcgtggtgaatgtcgagtactcgcagaaggaagtgatcgacttcatcgccaaa
gccaagtaa
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