Variovorax paradoxus EPS: Varpa_0808
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Entry
Varpa_0808 CDS
T01392
Name
(GenBank) Tripartite ATP-independent periplasmic transporter DctQ component
KO
K11689
TRAP-type transport system small permease protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Varpa_0808
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_0808
Transporters [BR:
vpe02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Varpa_0808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctQ
Abhydrolase_9_N
PrgI
DUF6350
Motif
Other DBs
NCBI-ProteinID:
ADU35026
UniProt:
E6V9H8
LinkDB
All DBs
Position
complement(912569..913129)
Genome browser
AA seq
186 aa
AA seq
DB search
MSEPQKIIDDEGHFHAEDEVVDLSDTIAEGWISLAVFWVLGLTVFYQFVTRYVMNDSAAW
TEEVARYLLIGVVFIGAAVGVAKNNQIQVDFFYRHMPRAMGRVLSMAVDVLRTAFFVAAV
VMTVQMMMKIGNQTRMTLVDLPMNVVYALCVFGFAAMAWRSLQVLRIHWKRGYSVLEQPE
STLSDR
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacctcagaaaatcatcgacgacgaaggccacttccacgcggaagacgaggtg
gtcgacctgtcggacaccatcgccgaaggctggatctcgctggccgtcttctgggtgctg
ggcctcacggtcttctaccagttcgtcacgcgctacgtgatgaacgactcggccgcctgg
acggaggaagtggcgcgctacctgctcatcggcgtcgtcttcatcggcgcggcggtgggc
gtggcgaagaacaaccagatccaggtggacttcttctaccgccacatgccgcgcgccatg
ggccgcgtgctctcgatggcggtggacgtgctgcgcaccgccttcttcgtggcggccgtg
gtcatgacggtgcagatgatgatgaagatcggcaaccagacgcgcatgaccctcgtcgac
ctgccgatgaacgtcgtgtacgcactgtgcgtgttcggcttcgcagcgatggcgtggcgc
tcgctgcaggtgctgcgcatccactggaagcgcggctacagcgtgctggagcagccggag
tcgacgctctccgaccgctga
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integrated database retrieval system
