Variovorax paradoxus EPS: Varpa_0822
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Entry
Varpa_0822 CDS
T01392
Name
(GenBank) homoaconitate hydratase family protein
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00290
Valine, leucine and isoleucine biosynthesis
vpe00660
C5-Branched dibasic acid metabolism
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
vpe01210
2-Oxocarboxylic acid metabolism
vpe01230
Biosynthesis of amino acids
Module
vpe_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
Varpa_0822
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
Varpa_0822
Enzymes [BR:
vpe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
Varpa_0822
4.2.1.35 (R)-2-methylmalate dehydratase
Varpa_0822
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GFIT
Motif
Pfam:
Aconitase
AcnX
Motif
Other DBs
NCBI-ProteinID:
ADU35040
UniProt:
E6V9J2
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All DBs
Position
924634..925920
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AA seq
428 aa
AA seq
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MTSMAPTRAPAQTLAQKLIARASGRERVSVGEIVTCGVDMAMFHDSSGPRRLKPMLEELG
AQIWDRSRVVLVMDHYVPERDDDSRRIVRIARDWARDQQLPHVYDSQGICHVVVPQHGHI
RPGMLCVGGDSHSPTGGAFGAYMFGIGSTEMLGVMVTGEIWLRVPETIRMWWDGALPAGV
TAKDMMLHMIGRFGMNGGRYQAVEFAGPAVAALSMQERMTLSNMSAELGAQAGLIAPDAT
TAEFLAGAGAPPVDMAPWFTDEGAELTDHRFDASTLEPYVAAPHSPANAHGVSRYVGTPV
DVAYIGACTGAKLDDLRAAAQVLRGHKVASGIRLIVAPASIRDQEAAREEGVLQVLMDAG
AELFPTACGACSGYGDPMGDDVTVISTTARNFKGRMGSPTAQVYLGSPYTVAATALRGCV
TDPREVLA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgatggctccaacccgcgcgccggcgcagacgctggcgcagaagctcatcgca
cgcgcgagcggacgcgagcgggtgtcggtgggcgagatcgtgacctgcggcgtcgacatg
gcgatgttccacgactcctcggggccgcggcgcctgaagcccatgctcgaggaactcggc
gcgcagatctgggaccgctcgcgtgtggtgctggtcatggaccattacgtgcccgagcgc
gacgacgattcgcgccgcatcgtgcgcatcgcgcgcgactgggcgcgcgaccagcaattg
ccgcatgtgtacgacagccagggcatctgccacgtggtggtgccgcagcacggccacatc
cgccccgggatgctgtgcgtgggcggcgattcgcactcgcccacgggcggtgcgttcggc
gcctacatgttcggcatcggcagcaccgagatgctgggcgtgatggtcaccggcgagatc
tggctgcgcgttcccgagaccatccgcatgtggtgggacggcgcgctgcccgcgggtgtg
accgccaaggacatgatgctgcacatgatcggccgcttcggcatgaacggcgggcgctac
caggcggtcgagttcgcggggccggcggtcgcggcgctgtcgatgcaggagcgcatgacg
ctctcgaacatgagcgccgagctgggcgcgcaggccgggctgatcgcacccgacgcgacc
accgccgagttcctggcgggcgctggtgcgccgcccgtcgacatggcgccctggttcacc
gacgaaggcgcggaactcacggaccatcgcttcgatgcctcgacgctcgaaccatatgtc
gccgcgccgcacagcccggccaacgcgcacggcgtgagccgctacgtgggcacgccggtc
gacgtggcctacatcggcgcctgcaccggcgccaagctcgacgacctgcgcgcggccgcg
caggtgctgcgcggccacaaggtggcgagtggcatccgcctcatcgtggcacccgccagc
atccgcgaccaggaagcggcgcgcgaagagggcgtgctgcaggtgctgatggacgccggt
gccgaactcttcccgaccgcgtgcggcgcctgctccggttatggcgatccgatgggcgac
gacgtcaccgtcatctcgaccaccgcgcgcaacttcaagggccgcatgggctcgccgacc
gcacaggtctacctgggttcgccctacacggtggcggcgactgcattgcgcggctgcgtg
accgatccgcgcgaggtgctcgcatga
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