Variovorax paradoxus EPS: Varpa_0845
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Entry
Varpa_0845 CDS
T01392
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_0845
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_0845
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_0845
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Varpa_0845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
ADU35063
UniProt:
E6V9L5
LinkDB
All DBs
Position
950893..952050
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AA seq
385 aa
AA seq
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MGLLAGTLAAPSVVLARVRPLRIGVIGSWSGPYAGGGRQFDAGMSVWLAAHNQQIAGRPV
ELLRRDVPGSAPEQARRNAQELVENERVDLFAGLDFSSNAYAVGTVAVQAKLPLVVMNAA
SSGITARCPYAVRLSFTIAQVTLPLARWALQQGLRDVCTVVADYASGVDAESTFVAGITA
GGGQVGAMLRVPLNTLDYSAYMLRLRELKPQAVFFFLPSGQMPATFLKFWRDRGMADTGI
RLLATGDATDDHYLEGIGELADGLVTSHHYSFAHESPANRRFTGVFETEYGSHLRPGYFA
VAAHDALAAIDAAMSSPSARGSLSGERLVDAFRGLKFESPRGPIEIDAHTRDIVQTVYIR
RTERREGRWVNQEFERFERVRDPGV
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
ttgggcttgcttgcgggcaccttggcggcgccttccgtggtcctcgcgcgggtccgcccg
ctgcgcatcggcgtcatcggttcctggtcaggtccttatgcgggcggcgggcggcagttc
gatgcgggcatgtcggtctggctggccgcgcacaaccagcagatcgcggggcggcccgtc
gaattgctgcgccgcgacgtgccgggcagtgcgccggaacaggcgcgccgcaatgcacag
gagctcgtggagaacgagcgcgtcgatctgttcgccggcctggacttcagctccaacgcc
tatgccgtcggcaccgtcgccgtgcaggcgaagctgccgctggtggtgatgaacgcggcc
tcctcgggcatcacggcgcgctgcccttatgccgtgcggctgtcgttcaccatcgcccag
gtcacgctgccgctcgcgcgctgggcgctgcagcagggcctgcgcgatgtctgcaccgtg
gtggccgactacgcctcgggcgtcgatgccgaaagcaccttcgtcgcgggcatcaccgcc
ggcggcggacaggtcggcgcgatgttgcgggtgccgctcaacacgctcgattactcggcc
tacatgctgcggctgcgcgagctcaagccgcaggcggtgttcttctttctgccctcgggg
cagatgccggcgacgttcctcaagttctggcgcgaccgcggcatggccgacaccggcatc
cgcctgctcgcgaccggcgacgccaccgacgaccattacctcgaaggcatcggcgaactg
gccgacgggctcgtgaccagccaccactactcgttcgcgcatgaatcgccggccaaccgc
cgcttcacgggcgtcttcgagacggaatacggcagccatctgcggccgggctatttcgcc
gtggcggcgcacgatgcgctcgcggccatcgatgcggcgatgagctcgccctcggcgcgc
ggctccctcagtggggagcgcctggtcgatgccttccggggcctcaagttcgagagcccg
cgcggcccgatcgagatcgacgcccacacgcgcgacatcgtgcagaccgtctacatccgc
cgcaccgagcggcgcgaggggcgctgggtcaaccaggagttcgagcgattcgagcgcgtg
cgcgacccgggcgtttga
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