Variovorax paradoxus EPS: Varpa_0847
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Entry
Varpa_0847 CDS
T01392
Name
(GenBank) ABC transporter related protein
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_0847
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_0847
Transporters [BR:
vpe02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Varpa_0847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_28
AAA_16
AAA_29
AAA
AAA_22
AAA_21
DEAD
AAA_25
AAA_18
ABC_ATPase
nSTAND3
RsgA_GTPase
AAA_33
Zeta_toxin
nSTAND1
AAA_15
NACHT
AAA_5
T2SSE
Cytidylate_kin
AAA_24
DUF87
APS_kinase
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
ADU35065
UniProt:
E6V9L7
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All DBs
Position
952659..954500
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AA seq
613 aa
AA seq
DB search
MRRSGEASSPSSPSHTVSGHPPAKSDRSDWATLRRLFPYLWQYKWRVMAALAFMVGAKVA
NVGVPVLLKNLIDTMTPKPDMAQALLIVPIGLLLAYGLLRFSTALFGELRELIFAKATEG
TARQIALEVFGHLHSLSLRFHLERQTGGMTRDIERGTRGVHSLISMSLYSIVPTIIELVL
VLTILGVKFDSLFVWITAAALVLYITFTVTVTEWRTQFRKTMNELDSMAQSRAVDSLLNY
ETVKYFNNEEFEAKRYDASLDRYRKAAIKSQRTLSMLNIGQQLLIAISLVLMLWRATSGV
VEGRMTLGDLVMVNAFMIQLYIPLNFLGVIYREIKQSLTDLDKMFVLMEKEREVRDAPDA
KPLAGIDSTIRFEDVNFAYEPARPILKHVSFEIPAGKTVAVVGPSGSGKSTLARLLYRFY
DVQQGRITIGGEDIREVTQSSVRRAIGIVPQDTVLFNDTVEYNIAYGRPGATREEVEGAA
RAARIHDFISATPMGYETTVGERGLKLSGGEKQRVAIARTLLKNPPIVIFDEATSALDSA
NERAIQSELKSAAQDKTTLVIAHRLSTVVDAHEILVLESGVIVERGTHAELLAKQGRYAQ
MWALQKSEAAPLL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcagcggcgaagcctcttctccatcctctccttcccacaccgtctccggccac
ccgccggcgaaaagcgaccgctccgactgggcgacgctgcgccggctctttccctacctc
tggcaatacaagtggcgcgtgatggccgcgctcgcgttcatggtgggcgccaaggtggcc
aacgtgggcgtgccggtgctgctgaagaacctcatcgacacgatgacgcccaagccggac
atggcgcaggcgctgctcatcgtgccgatcggtctcctgctcgcctacggcctcctgcgc
ttctcgaccgcgctcttcggcgaactgcgcgaactgatcttcgccaaggccaccgagggc
acggcgcggcagatcgcgctggaggtcttcggccacctgcattcgctgagcctgcgcttc
cacctggagcgccagaccggcggcatgacgcgcgacatcgagcgcggcacgcgcggcgtg
cactcgctcatctcgatgtcgctctacagcatcgtccccaccatcatcgagctggtgctg
gtgctcacgatcctgggcgtgaagttcgattcgctgttcgtctggatcaccgcggcggcg
ctggtgctctacatcaccttcacggtgacggtgaccgagtggcgcacccagttccgcaag
accatgaacgagctcgattcgatggcccagagccgcgcggtcgattcgctcctgaactac
gaaaccgtcaagtacttcaacaacgaggagttcgaggccaagcgctacgacgcgagcctg
gaccgctaccgcaaggcggccatcaagagccagcgcacgctgagcatgctcaacatcggg
cagcagttgctgatcgcgatcagcctggtgctgatgctgtggcgggccacctcgggcgtg
gtcgaagggcgcatgacgctgggcgacctggtgatggtcaacgccttcatgatccagctc
tacattccgctcaacttcctgggcgtgatctaccgcgagatcaagcagagcctgaccgac
ctggacaagatgttcgtgctcatggagaaggagcgcgaggtgcgcgatgcgcccgatgcg
aagcccctggccggcatcgattccaccatccgcttcgaggacgtgaactttgcctacgaa
cccgcgcggccgatcctcaagcatgtgagcttcgagattccagccggcaagacggtggcg
gtggtcggcccctccgggtcgggcaagtccacgctggcgcggctgctctatcgcttctac
gacgtgcagcagggccgcatcaccatcggcggcgaagacattcgcgaggtcacccagtcg
agcgtgcgccgggccatcggcatcgtgccgcaggacacggtgctcttcaacgacacggtc
gaatacaacatcgcgtacggccgccccggcgcgacgcgcgaagaggtcgaaggcgcagcg
cgggctgcgcgcatccacgacttcatctcggccacgcccatgggctacgaaacgacggtg
ggcgagcgcggcctcaagctctcgggaggcgagaagcagcgggtggccatcgcgcgcacg
ctgctgaagaatccgccgatcgtgatcttcgatgaggccacctcggcgctcgattcagcc
aacgagcgggccatccagtcggagctcaagagcgctgcgcaggacaagaccacgctggtc
attgcgcaccggctgtcgaccgtggtcgatgcgcacgagatcctcgtgctcgaatccggc
gtgatcgtcgagcgcggcacgcacgccgagctgctcgccaagcaaggccgctatgcgcag
atgtgggctttgcagaagagcgaagcggcgccgctgctctag
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