Variovorax paradoxus EPS: Varpa_0850
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Entry
Varpa_0850 CDS
T01392
Name
(GenBank) transcriptional regulator, LysR family
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpe03000
]
Varpa_0850
Transcription factors [BR:
vpe03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Varpa_0850
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
ADU35068
UniProt:
E6V9M0
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Position
957098..958090
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AA seq
330 aa
AA seq
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METKWLEDFISLAETRSFSRSAQLRHVTQPAFSRRIQALEGWAGTDLVDRSSYPTRLTPA
GQTLYSQAIEMLQSLQSTRAMLRGHSAAGQDVIEIAVPHTLAFTFFPSWVTSLREHFGPI
KSRLIALNVHDAVLRLVEGSCDLLIAYHHPSQPLQLDNNKYEMVSLGEETVAPWVKADAD
GAPRFRLPGRPGQPLPYLGYAPGAYLGRVVDQLLKESGTAIHLDRVYETDMAEGLKVMAL
EGHGIAFLPQSAVRKEIKARKLVSALPPEIDSLEATMEIRAYRERPSAPVPVKTGNGRSA
KVAAVSEGIQPKRTADALWSYLVGTQPATL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaagtggctcgaagacttcatcagcttggcggagacccgcagcttcagccgc
tcggcccagttgaggcacgtgacgcagccggcgttctcccgccgcatccaggcgctcgaa
ggctgggccggtaccgacctcgtcgatcgcagctcctaccccacgcggctcacgcccgcg
ggccagacgctctacagccaggccatcgagatgctgcagtcgctgcagagcacccgggcc
atgctgcgcggccactcggccgccgggcaggacgtgatcgagatcgccgtgccgcacacg
ctggccttcaccttctttccctcgtgggtgaccagcctgcgcgagcacttcgggccgatc
aagagccggctcatcgcgctcaacgtgcacgacgcggtgctgcggctggtcgagggcagt
tgcgacctgctgatcgcctaccaccacccctcgcagccgctgcagctggacaacaacaag
tacgagatggtgagcctcggcgaggaaaccgtggccccctgggtcaaggccgatgccgac
ggcgcgccgcgcttccggctgccgggccgaccgggccaaccgcttccttacctgggctat
gcgcccggcgcctacctgggccgcgtggtcgaccagttgctcaaggagtcgggcacggcc
atccacctggaccgcgtctacgagaccgacatggccgaaggcctgaaggtcatggcgctc
gaaggccatggcatcgccttcctgccgcagagcgcggtgcgcaaggagatcaaggcccgc
aagctcgtgagcgcgctgccgccggagatcgacagcctggaggcgacgatggaaatccgc
gcctaccgcgagcggccgagcgcaccggtgcccgtgaagaccggcaatggccggtctgcc
aaggtggcggcggtgtccgaaggcatccagcccaagcgaacggccgacgcgctctggtcg
taccttgtcggcacccagccggccaccctctga
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