Variovorax paradoxus EPS: Varpa_0851
Help
Entry
Varpa_0851 CDS
T01392
Name
(GenBank) fumarate lyase
KO
K01744
aspartate ammonia-lyase [EC:
4.3.1.1
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00250
Alanine, aspartate and glutamate metabolism
vpe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Varpa_0851
Enzymes [BR:
vpe01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.1 aspartate ammonia-lyase
Varpa_0851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
Motif
Other DBs
NCBI-ProteinID:
ADU35069
UniProt:
E6V9M1
LinkDB
All DBs
Position
958265..959719
Genome browser
AA seq
484 aa
AA seq
DB search
MNSNFRTEHDFLGEKQIPAAAYWGVHTARAVENFAISGTRISAMPDLVRALAFVKKAATR
ANADLGAIDRDRAAAIILACEDIIEGKLLDEFVVDVIQGGAGTSTNMNANEVICNLALEK
LGHEKARYDVLHPNDHVNASQSTNDVYPTAVRLALWFAIGKLLEAMAALRRSFEAKALEF
KDILKIGRTQLQDAVPMTLGQEFLTYAIMIGEDEARLGEARALIEEINLGATAIGTGINA
PHGYANLACQYLAEQTGVPLKQAANLIEATQDTGAFVQLSGVLKRVATKLSKTCNDLRLL
SSGPQAGFGEIRLPARQAGSSIMPGKVNPVIPEVMNQVAFEVIGNDITVTMASEAGQLQL
NAFEPIMGWSLFKSIKHLGNACNTLQLNCVDGIEANREFLAKRVRESVTLVTALNPLIGY
EKAALIAKTALATGGPIDLVAESLGIMTRAEMEALLVPENLTQPVRLSAAPVPPAAEPSG
TKAA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaactccaatttcaggactgaacacgacttcctcggcgagaagcagattcctgccgcc
gcctactggggcgtgcacacggcgcgcgccgtcgagaacttcgccatctccggcacccgc
atctcggccatgcccgacctcgtgcgcgcgctggccttcgtgaagaaggccgcgacccgc
gccaacgccgacctgggcgccatcgaccgcgaccgtgccgccgcgatcatcctggcctgc
gaggacatcatcgaaggcaagctgctcgacgagttcgtggtcgatgtgattcaaggcggc
gccggcacctcgaccaacatgaacgcgaacgaggtgatctgcaacctcgcgctcgaaaaa
ctcggccacgagaaggcgcgctacgacgtgctgcaccccaacgaccacgtcaacgcctcg
cagagcaccaacgatgtgtacccgacggcggtgcgcctggcgctgtggttcgcgatcggc
aagctgctcgaagccatggccgcgctgcgccgcagcttcgaggccaaggcgctcgagttc
aaggacatcctgaaaatcggccgcacccagctgcaggacgcggtgccgatgacgctgggc
caggagttcctgacctacgcgatcatgatcggcgaggacgaggcgcggctgggcgaggcc
cgcgcgctcatcgaggaaatcaacctcggcgccaccgcgatcggcaccggcatcaacgcg
ccgcacggctatgccaacctcgcctgccagtacctggccgagcagaccggcgtgcctttg
aagcaggccgccaacctcatcgaggccacgcaggacacgggcgccttcgtgcagctctcg
ggtgtgttgaagcgcgtggccaccaagctcagcaagacctgcaacgacctgcgcctgctc
tccagcggcccgcaggccggcttcggcgagatccgactgcccgcgcggcaggcgggctcg
tcgatcatgccgggcaaggtcaacccggtgattccggaagtcatgaaccaggtggccttc
gaagtcatcggcaacgacatcaccgtgaccatggcgtccgaggcgggtcagctgcagctc
aacgccttcgagccgatcatgggctggagccttttcaagagcatcaagcacctgggcaac
gcctgcaacacgctgcagctgaactgcgtcgacggcatcgaggccaaccgggagttcctg
gccaagcgggtgcgcgaatcggtcacgctggtcactgcgctcaatccgctcatcggctac
gagaaggcggcgctcatcgccaagacggcgctcgccacgggcgggcccatcgacctggtg
gccgagtcgctcgggatcatgacgcgcgccgaaatggaggcgctgctggtgcccgagaac
ctgacccagccggtgcgcctgtccgctgcaccggtcccgccggctgccgagccttcgggc
acaaaggctgcttag
DBGET
integrated database retrieval system
