Variovorax paradoxus EPS: Varpa_0858
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Entry
Varpa_0858 CDS
T01392
Name
(GenBank) TRAP dicarboxylate transporter, DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Varpa_0858
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_0858
Transporters [BR:
vpe02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Varpa_0858
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DctM
Otopetrin
CitMHS
Motif
Other DBs
NCBI-ProteinID:
ADU35076
UniProt:
E6V9M8
LinkDB
All DBs
Position
complement(965576..966874)
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AA seq
432 aa
AA seq
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MIATLLFVAFVLMMLVGVPIGAALGLAGAACIALANSDAQWFGLLAVPQNFYAGLGKYPL
LAIPMFVLVGSIFDRSGVALRLVNFAVAIVGRGPGMLPLVAIAVAMFLGGISGSGPANAA
AVGAVMIAAMSRAGYPAAFSASVVGAAAATDILIPPSVAFIVYSVLVPGASVPALFAAGM
IPGIMAGLALMIPAVWLARKHKMGALEATLPRPPFWKSFREAIWGLAAPVLILGGMRAGW
FTPTEAAVVAVFYGLFVGMCIHRTIKVRDLFVILRESGELSAVILLVVSLAGIFAYSLST
LGIIDPVTRAIVNSGLGEYGILALLILLLITVGMFLDGVSIFLIFVPLLLPIVQYYKWDP
VWFGVILTLKVALGQFTPPLAVNLMVSCRIAKVRMEETVRWVGWMLFSMFVVMVLVIAFP
ELALWLPRKLGY
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgccaccctgctcttcgtcgccttcgtgctgatgatgctggtgggcgtgcccatc
ggcgccgccctcggcctcgcaggcgccgcctgcatcgcactcgccaacagcgacgcccaa
tggttcggcctcctggccgtgccgcagaacttctacgcgggcctgggcaagtacccgctg
ctggccattccgatgttcgtgctggtcggctcgatcttcgaccgctcgggcgtggcgctg
cggctggtgaacttcgcggttgccatcgtcgggcgcggccccggcatgctgccgctggtg
gcgattgccgtggcgatgttcctcggcggcatctcgggctcgggcccggccaacgccgcc
gccgtgggcgcggtgatgatcgcggccatgtcgcgcgccggctacccggccgcgttctcg
gcgagcgtggtgggcgccgcggcggccaccgacatcctgattccgccctcggtcgcgttc
atcgtgtactcggtgctggtacccggcgcctcggtgccggcgctgttcgcggccggcatg
atccccggcatcatggccggcctcgcgctgatgattccggccgtgtggctcgcccgcaag
cacaagatgggcgcgctcgaagcgacgctgccgcgcccgccgttctggaagagctttcgc
gaagcgatctggggccttgcggcgccggtgctgatcctcggcggcatgcgcgccggctgg
ttcacgccgaccgaagcggcggtggtggcagtgttctacggcctcttcgtgggcatgtgc
atccaccggaccatcaaggtgcgcgacctcttcgtgatcctgcgcgaatcgggcgagctc
tcggcggtgatcctgctggtggtgtcgctcgcagggatctttgcctactcgctttcgacg
ctgggcatcatcgatccggtgacgcgggccatcgtgaattcggggttgggcgaatacggc
atcctcgcgctgctgatcctcttgctcatcaccgtgggcatgttcctcgatggcgtgtcg
atcttcctgatcttcgtgccgctgcttctgccgatcgtgcagtactacaagtgggacccg
gtgtggttcggcgtgatcctcacgctcaaggtcgcgctcggccagttcacgccgccgctt
gcggtgaacctcatggtctcgtgccgcatcgccaaggtgcgcatggaagagaccgtgcgc
tgggtgggctggatgctgttctcgatgttcgtggtgatggtgctggtcatcgcattcccc
gagctcgcgctctggctgccgcgcaagctgggctactga
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