Variovorax paradoxus EPS: Varpa_0907
Help
Entry
Varpa_0907 CDS
T01392
Name
(GenBank) transcriptional regulator, AraC family
KO
K18991
AraC family transcriptional regulator, activator of mtrCDE
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpe03000
]
Varpa_0907
Transcription factors [BR:
vpe03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Varpa_0907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cupin_6
HTH_18
HTH_AraC
HTH_20
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
ADU35125
UniProt:
E6VAL5
LinkDB
All DBs
Position
1017090..1018049
Genome browser
AA seq
319 aa
AA seq
DB search
MNPHADPLSELVDWLGLRGRMDLHCLFGEDWAAPHEAIGPWRAPFHIVLRGRCELWLPES
RTLVPLEEGSLVILPRGPAHVLRTAGLQGEGRAIRLRTGELLDLKTNLKRPEKADTDILC
GEFEFPGRRRSVLLEALPEPMVIAFADRPGFAWLEGLVRLMAEEIAQQRAGAAAIVAQLS
GTLFTLAVRAHLETRPELTGVLGLMASPRLAPGLRAMLAQPDEPWTVASLAERCHLSRAT
FAREFTRRVGTGPLEFLTTLRMELASRLLAQGGQGAQDTASIAEAVGYRSEAAFNRAFAR
HAGITPGRFRRAGAGKMEP
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgcatgccgaccccctgagcgaactcgtcgactggctcggcctgcgcggccgc
atggacctgcactgcctgttcggcgaggactgggcggcgccgcacgaggccatcggaccg
tggcgcgcgccctttcatatcgtgctgcgcgggcgctgcgagctctggctgcccgagagc
cgcacgctggtgccgctggaggagggcagcctcgtgatcctgccgcgcgggccggcgcac
gtgctgcgcaccgcgggcctgcagggcgaggggcgcgccatcaggctgcggaccggcgaa
ctgctcgatctcaagaccaacctcaagcgccccgaaaaggcggacaccgacatcctctgc
ggcgaattcgaattccccggccggcggcgcagcgtgctgctggaggcgctgcccgagccg
atggtgatcgccttcgccgaccgccccggcttcgcgtggctcgaagggctggtgcggctg
atggcagaggagatcgcgcagcagcgcgccggcgccgcggccatcgtggcgcaactgtcg
ggcacgctcttcacgctggcggtgcgcgcgcacctggaaacgaggcccgagctcaccggc
gtgctcggcctcatggccagcccgcgtctggcgcccgggctgcgggcgatgctggcgcag
ccggatgaaccctggaccgtggcgtcgctggccgagcgctgccacctctcgcgcgccacc
ttcgcgcgcgaattcacgcggcgcgtgggcaccgggccgctcgaatttctcaccacgctg
cgcatggagctcgcgtcgcgcctgctggcacagggcgggcagggcgcgcaggacacggcg
agcatcgccgaggcggtcggctaccggtccgaggctgcgttcaaccgcgccttcgcgcgc
cacgcgggcatcacgccggggcgattccggcgcgcgggcgccggcaaaatggagccatga
DBGET
integrated database retrieval system
