Variovorax paradoxus EPS: Varpa_0959
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Entry
Varpa_0959 CDS
T01392
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00300
Lysine biosynthesis
vpe00470
D-Amino acid metabolism
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
vpe01120
Microbial metabolism in diverse environments
vpe01230
Biosynthesis of amino acids
Module
vpe_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Varpa_0959
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Varpa_0959
Enzymes [BR:
vpe01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Varpa_0959
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ADU35177
UniProt:
E6UUK8
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All DBs
Position
1070658..1071560
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AA seq
300 aa
AA seq
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MRIRFTKMQGAGNDFVVLDETRGTLGLSAAQYRFLADRHFGVGADQILTVRPSPAEGIDF
QYVIHNADGGEVEQCGNGARCFMRFVKEHKLTDKTQVRVQTLAGVIEPRMGADGRVTVDM
GAPIFEAARVPFDTAGLDAQPDGSWEKWHLALGTRAGSPIVSVAVLSMGNPHAVQVVDNV
DTAPVAEQGPQIEHHPRFPQRVNAGFMQVVDRSHIKLRVFERGAGETLACGTGACAAVVA
GIRLGLLESRVDVQTHGGILTIEWQGEGQPVLMTGPATTVFEGDIDVPDVPEVPEISEQP
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatccgctttaccaagatgcagggcgccggcaacgatttcgtcgtgctggacgaa
acccgcggcacgctgggcctcagtgccgcgcagtaccgctttttggccgaccgccatttc
ggcgtcggcgccgaccagatcctcaccgtgcggccatcgcccgcggaaggcatcgacttt
caatacgtgatccacaacgccgacggcggcgaggtcgagcagtgcggcaacggcgcgcgc
tgcttcatgcgcttcgtgaaggagcacaagctcaccgacaagacccaggtgcgcgtgcag
acgctggccggcgtgatcgagccgcgcatgggcgccgacggccgcgtgacggtcgacatg
ggcgcccccatcttcgaggccgcgcgcgtgcccttcgacaccgccgggctcgatgcacag
cccgatggttcctgggaaaagtggcacctggcgctgggcacccgggccggcagcccgatc
gtgtcggtcgcggtgctctcgatgggcaatccgcacgcggtgcaggtggtcgacaacgtc
gacaccgcgccggtggccgagcagggcccgcagatcgagcaccacccgcgctttccgcag
cgggtgaacgcgggcttcatgcaggtggtcgatcgctcccatatcaagctgcgcgtgttc
gagcgcggcgccggcgaaacgctggcctgcggcacgggcgcctgcgcggcggtggtcgca
ggcatccggctcgggttgctggagtcacgcgtcgacgtgcagacgcacggcggcatcctc
acgatcgaatggcagggcgagggccagccggtgctcatgacgggcccggccacgacggtg
ttcgagggcgacatcgacgtacccgacgtgcccgaagtacccgaaatttcggaacagcca
tga
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