KEGG   Variovorax paradoxus EPS: Varpa_0959
Entry
Varpa_0959        CDS       T01392                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe00300  Lysine biosynthesis
vpe00470  D-Amino acid metabolism
vpe01100  Metabolic pathways
vpe01110  Biosynthesis of secondary metabolites
vpe01120  Microbial metabolism in diverse environments
vpe01230  Biosynthesis of amino acids
Module
vpe_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Varpa_0959
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Varpa_0959
Enzymes [BR:vpe01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     Varpa_0959
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: ADU35177
UniProt: E6UUK8
LinkDB
Position
1070658..1071560
AA seq 300 aa
MRIRFTKMQGAGNDFVVLDETRGTLGLSAAQYRFLADRHFGVGADQILTVRPSPAEGIDF
QYVIHNADGGEVEQCGNGARCFMRFVKEHKLTDKTQVRVQTLAGVIEPRMGADGRVTVDM
GAPIFEAARVPFDTAGLDAQPDGSWEKWHLALGTRAGSPIVSVAVLSMGNPHAVQVVDNV
DTAPVAEQGPQIEHHPRFPQRVNAGFMQVVDRSHIKLRVFERGAGETLACGTGACAAVVA
GIRLGLLESRVDVQTHGGILTIEWQGEGQPVLMTGPATTVFEGDIDVPDVPEVPEISEQP
NT seq 903 nt   +upstreamnt  +downstreamnt
atgcgaatccgctttaccaagatgcagggcgccggcaacgatttcgtcgtgctggacgaa
acccgcggcacgctgggcctcagtgccgcgcagtaccgctttttggccgaccgccatttc
ggcgtcggcgccgaccagatcctcaccgtgcggccatcgcccgcggaaggcatcgacttt
caatacgtgatccacaacgccgacggcggcgaggtcgagcagtgcggcaacggcgcgcgc
tgcttcatgcgcttcgtgaaggagcacaagctcaccgacaagacccaggtgcgcgtgcag
acgctggccggcgtgatcgagccgcgcatgggcgccgacggccgcgtgacggtcgacatg
ggcgcccccatcttcgaggccgcgcgcgtgcccttcgacaccgccgggctcgatgcacag
cccgatggttcctgggaaaagtggcacctggcgctgggcacccgggccggcagcccgatc
gtgtcggtcgcggtgctctcgatgggcaatccgcacgcggtgcaggtggtcgacaacgtc
gacaccgcgccggtggccgagcagggcccgcagatcgagcaccacccgcgctttccgcag
cgggtgaacgcgggcttcatgcaggtggtcgatcgctcccatatcaagctgcgcgtgttc
gagcgcggcgccggcgaaacgctggcctgcggcacgggcgcctgcgcggcggtggtcgca
ggcatccggctcgggttgctggagtcacgcgtcgacgtgcagacgcacggcggcatcctc
acgatcgaatggcagggcgagggccagccggtgctcatgacgggcccggccacgacggtg
ttcgagggcgacatcgacgtacccgacgtgcccgaagtacccgaaatttcggaacagcca
tga

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