Variovorax paradoxus EPS: Varpa_1016
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Entry
Varpa_1016 CDS
T01392
Name
(GenBank) multi-sensor signal transduction histidine kinase
KO
K02668
two-component system, NtrC family, sensor histidine kinase PilS [EC:
2.7.13.3
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Varpa_1016
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vpe01001
]
Varpa_1016
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vpe02022
]
Varpa_1016
02035 Bacterial motility proteins [BR:
vpe02035
]
Varpa_1016
Enzymes [BR:
vpe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Varpa_1016
Protein kinases [BR:
vpe01001
]
Histidine kinases
NtrC family
Varpa_1016
Two-component system [BR:
vpe02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
Varpa_1016
Bacterial motility proteins [BR:
vpe02035
]
Pilus system
Twitching motility proteins
Varpa_1016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HisKA
HATPase_c
PAS_4
PAS
PAS_8
Diguanyl_cycl_sensor
CarD_C
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
ADU35234
UniProt:
E6UUR5
LinkDB
All DBs
Position
complement(1134629..1136326)
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AA seq
565 aa
AA seq
DB search
MSTPLWSRGDPVTDWDVLEPGGSESTALLRLWRGFMAARCFVALVLVVLQGVAFALGQTM
QAVAIAICAAYLVVTWLELRYAHFEPPIRGFSTLWLLTIGVDLATFTAMQVLQSGNVNYT
PLFALPVLMSAVLGTMIVSLGTTASVTLLLLADAGWHWLQQPGDPSARFVQAALTGTGLF
VVALLAHELARRLAREEAVAQRNRSSAQMQAEVNDLVIETLAEGVLVIDAEGMVHAANPA
ADAILGQGLAKLSLPFALHAQPAWHALAALSRQTFARRAPQSEEIPVAQARGAAREVRVR
TRLTPTSDKRADSLCVMFLQDLRELEARIRTEKLAAMGRMSAAVAHEIRNPLAAIAQASA
LLSEDLTDPAHRKLTDMVQHNAQRLARIVDDVLDVSRARQQRVLSLGEQVVLDPAVQVLA
EEWVRQTQRKGVLVALDAPGIDVRFDAEHLRRLLVNLLDNASRYAGKGEGAIQVITTLQR
AGTNRPALQVWSDGAPLEPAVQRHLFEPFFSSESRSSGLGLFLCRELCRRHGATIGYERR
ALVAGGPEGNEFFVSFAASENRLTQ
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccctctctggtcgcgcggcgatccggtcacggattgggacgtgctcgagccg
ggcggcagcgaaagcacggcgctgctgcggctctggcgcggcttcatggccgcgcgctgc
tttgtcgcgctggtgctggtggtgctgcagggcgtggccttcgcgctcgggcagacgatg
caggcggtggccatcgcgatctgcgcggcctacctcgtcgtcacctggctggagctgcgc
tatgcgcacttcgaaccgccgatccgcggcttctcgacactctggctgctgaccatcggc
gtcgacctcgccaccttcaccgcaatgcaggtgctgcagagcggaaacgtcaactacaca
ccgctgttcgcgctgcctgttctcatgagcgcggtgctcggcacgatgatcgtgagcctg
ggcaccacggccagcgtcacgctgctgctgctggccgacgccggatggcactggctgcag
cagccgggcgacccttcggcccgcttcgtgcaggcggcgctcaccggcaccggcctcttc
gtggtggcgctgctcgcgcacgaactggcacgccggctcgcgcgcgaagaagcagtcgcg
cagcgcaaccgcagcagcgcgcagatgcaggcggaggtcaacgacctggtgatcgagacg
ctggccgaaggcgtgctcgtgatcgatgccgaaggcatggtgcatgcggccaatccggcc
gccgacgcgatcctgggacaaggcctcgcgaagctgtcgctgccgttcgcgctgcacgcg
cagcccgcctggcatgcgctggccgcgctctcgcgccagaccttcgcacggcgggcgccg
cagtccgaagaaattcccgttgcgcaggcccgcggcgcggcgcgcgaggtgcgcgtgcgc
acccgcctcacgcccaccagcgacaagcgcgccgacagcctctgcgtgatgttcctgcaa
gacctgcgcgaactcgaggcccgcatccgcaccgagaagctggccgcgatgggccgcatg
tccgccgccgtggcgcacgaaatccgcaacccgctggccgccatcgcgcaagccagcgca
ctgctcagcgaagacctcaccgatcccgcgcaccgcaagctcaccgacatggtccagcac
aacgcgcagcggctcgcccgcatcgtggacgacgtgctcgacgtctcgcgcgcgcgccag
cagcgcgtgctctcgctcggtgaacaggtcgtgctcgatccggcggtgcaggtgctggcc
gaggagtgggtgcgccagacgcagcgcaagggtgtgcttgtcgcgctcgacgcgcccggc
atcgatgtgcgcttcgacgccgagcacctgcgccgcctgctggtgaacctgctggacaac
gcatcgcgctatgcgggcaagggcgagggcgcgatccaggtcatcaccacgctgcagcgc
gcgggtaccaaccgaccggccctgcaggtgtggagcgacggtgcgccgctggagccggcg
gtgcagcgccatctgttcgagcccttcttctcgtccgaaagccgctccagcggcctcggc
ctttttctctgccgcgagctgtgccggcgtcatggcgccaccatcggctacgagcggcgg
gcgctggtggcgggcggccccgagggcaacgaattcttcgtcagctttgccgccagcgag
aaccggctgacacaatag
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