Variovorax paradoxus EPS: Varpa_1024
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Entry
Varpa_1024 CDS
T01392
Name
(GenBank) tRNA-i(6)A37 thiotransferase enzyme MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpe03016
]
Varpa_1024
Enzymes [BR:
vpe01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Varpa_1024
Transfer RNA biogenesis [BR:
vpe03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Varpa_1024
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GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ADU35242
UniProt:
E6UUS3
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All DBs
Position
complement(1145148..1146515)
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AA seq
455 aa
AA seq
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MKKVFIKTFGCQMNEYDSDKMADVLNAAQGYEPTQNVDEADLILFNTCSVREKAQEKVFS
DLGRVKHLKAKGVKIGVGGCVASQEGAAIIARAPYVDIVFGPQTLHRLPEMLNDRERLNR
PQVDISFPEIEKFDHLPPARVEGATAFVSIMEGCSKYCSYCVVPYTRGEEVNRPLDDVLV
EIAGLADQGVREITLLGQNVNAYRGKMGDTAEIADFALLIEYVAEIPGIERIRYTTSHPN
EFTPRLIEAYAKVPQLVSHLHLPVQHGSDRILMAMKRGYTAMEYKSTVRKLRAIRPDLAL
SSDFIVGFPGETDEDFAKMMKLIDDCQFDNSFSFIFSPRPGTPAAALHDDTPHEVKLARL
QTLQRVIDGNVRRFGDALVGSTQRVLVEGASRKDANELMGRTACNRVVNFEGDARLVGQM
TDLRITRSLAYTLRGEVVTRESSPALPQPAVALAH
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtattcatcaagaccttcggctgccagatgaacgagtacgactcggacaag
atggccgacgtgctgaacgccgcgcagggctacgagccgacgcagaacgtggacgaggcc
gacctcatcctgttcaacacctgctcggtgcgcgagaaggcccaggaaaaggtgttctcc
gacctcggccgcgtgaagcacctgaaggccaagggcgtgaagatcggcgtgggcggctgc
gtcgcgagccaggaaggcgcggccatcatcgcgcgcgcgccgtacgtcgacatcgtgttc
ggcccgcagacgctgcaccgcctgcccgagatgctcaacgaccgcgagcgcctgaaccgc
ccgcaggtggacatcagcttccccgagatcgagaagttcgatcacctgccgcccgcgcgc
gtggaaggcgcgaccgccttcgtgtcgatcatggaaggctgctccaagtactgcagctat
tgcgtggtgccctacacccgcggcgaggaagtgaaccggccgctcgacgacgtgctggtc
gagatcgccggcctcgccgaccagggcgtgcgcgagatcacgctgctgggccagaacgtg
aacgcctaccgcggcaagatgggcgacaccgccgaaatcgccgacttcgcgctgctcatc
gaatacgtcgccgagatccccggcatcgagcgcatccgatacaccacgagccacccgaac
gagttcacgccgcggctcatcgaggcgtatgccaaggtgcctcagctcgtgagtcacctg
cacctgccggtgcagcacggcagcgaccgcatcctcatggcgatgaagcgcggctacacc
gccatggaatacaagagcacggtgcgcaagctgcgcgccatccgccccgacctggccctc
tccagcgacttcatcgtcggcttccccggcgagaccgatgaagacttcgccaagatgatg
aagctcatcgacgactgccagttcgacaacagcttcagcttcatcttcagcccgcgtccc
ggcacgccggccgccgcgctgcacgacgacacgccgcatgaagtgaagctcgcgcgtctg
cagacgctgcagcgcgtgatcgacggcaacgtgcgccgcttcggcgatgcgctggtgggc
agcacgcagcgcgtgctggtcgagggcgcctcccgcaaggacgcgaacgaactcatgggc
cgcaccgcctgcaaccgcgtcgtcaacttcgaaggcgacgcacgcctggtcggccagatg
accgacctgcgcatcacgcgctcgctggcctacacgctgcgcggcgaagtggtgacgcgc
gaatcgtcgccggcgctgccgcagcccgccgtggcgctcgcccactga
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