Variovorax paradoxus EPS: Varpa_1071
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Entry
Varpa_1071 CDS
T01392
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_1071
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_1071
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Varpa_1071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ADU35289
UniProt:
E6UVQ6
LinkDB
All DBs
Position
complement(1194418..1195239)
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AA seq
273 aa
AA seq
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MNPNASPLQRSCRLLLWAYAIAVLVFLMAPILVIMPLSFSSGSFFYYPLPGFSLRWYEDF
FTSGNWLPTLKNSLLVGVGATVLATVLGTLAAFGFWRTRFRGRAFVFALLLSPMVVPVII
VAVGMYFAFARVGLANSLIGLTLAHAALGVPFVLVSVSASLAGFDVNLLRAAANLGASPL
RAFFRVALPMLAPGIFSGALFAFAISFDEVVVAMLLTGPDQRTLPRQMFAGINDNISLTI
TAAATLLIGLAVLLLLTLEWLRRRSARLRGVAA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgaacgcatcccccctccagcgaagctgccgcctcttgttgtgggcgtacgcg
atcgcggtgcttgtcttcctgatggcgccgatcctggtcatcatgccgttgtcgttttcc
agcggctcctttttctactacccgctgcccggcttttcattgcgctggtatgaagatttc
ttcacctccggcaattggctgcccacgctgaagaacagcctgctcgtgggtgtcggtgcg
acggtgctggcgaccgttctgggaacgttggctgccttcggcttctggcgcacccggttc
cgcggacgggccttcgtcttcgcactcctgctttctccgatggtcgtgccggtcatcatc
gtggcggtggggatgtacttcgcctttgcgcgcgtgggtctggccaacagcctcatcggc
ctgaccctcgcgcatgcggccctcggcgtacctttcgtgctggtcagcgtcagcgcttca
ctggccggattcgatgtcaacctgctgcgcgccgcagcgaatctgggcgcatcgccgctg
cgcgcgttctttcgcgtggccttgcccatgctggcgccgggcatcttctcgggcgcgctg
ttcgccttcgccatctccttcgacgaagtcgtggtggcgatgctgctgacgggaccggac
caacgcacgctgccgcgccagatgttcgccggcatcaacgacaacatcagcttgaccatc
acggcagccgcgacgctgctgatcggcctggctgtccttttgctgctcaccctggagtgg
ctgcggcggcgcagcgcacgactgcgcggcgtggcggcatga
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