Variovorax paradoxus EPS: Varpa_1074
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Entry
Varpa_1074 CDS
T01392
Name
(GenBank) spermidine/putrescine ABC transporter ATPase subunit
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_1074
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_1074
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Varpa_1074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_30
SMC_N
nSTAND_NTPase5
AAA_16
Ctf8
nSTAND3
AAA_22
AAA_25
bpMoxR
AAA_29
Rad17
Motif
Other DBs
NCBI-ProteinID:
ADU35292
UniProt:
E6UVQ9
LinkDB
All DBs
Position
complement(1197595..1198677)
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AA seq
360 aa
AA seq
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MSVIATFDQVCKSYDGLSQVVDHLDLAVQEGEFLSLLGPSGSGKTTTLMMLAGFETPTSG
DIRLAGRSLRAVPAYKRDIGMVFQNYALFPHMTVGENVAFPLQVRNVGRDEQARRVKLAL
DMVQLSHAAQRLPAQLSGGQQQRVAVARALVFEPKLVLMDEPLGALDKNLREQMQFEIRQ
LHRRLGVTMVYVTHDQAEALTMSDRIAVFHQGKIQQLCGPREMYEQPSSAFVATFVGESN
RLSGTVEALVDGVAVLRTEGGSLLQAVAGDGLRVGGEGVFTLRPERAELSTSRSAEGVGV
AATLEEAIFVGDKMRARLRTSDGQEMIACRSPDQFDTLPTPGSRLCVTWRIEHARIFVAP
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcattgccaccttcgatcaagtctgcaagtcctacgacggcttgtcgcaggtc
gtcgatcacctcgacctcgcagtgcaggaaggcgaattcctctcgctgctcggcccctcc
ggatcgggcaagacgacaaccctgatgatgctggccggcttcgagacgccgaccagcggg
gacatccgcctggcgggtcgatcgctgcgcgcggtgcccgcatacaagcgggacatcggc
atggtgttccagaactacgcgttgtttccccacatgaccgttggcgagaacgtcgccttt
ccattgcaggtccgcaacgtcggacgcgatgagcaggcacgccgggtgaagctcgcgctg
gacatggtgcagttgtcgcatgcggcacaacgattgccggctcagttgtccggaggccag
cagcagcgcgtcgccgtggcccgggcgctggtgttcgagcccaagctggtgttgatggac
gaaccgctgggtgcgctggacaagaacctgcgggaacaaatgcagttcgagattcggcaa
ctgcaccggcgcctcggcgtgaccatggtgtatgtgacgcacgaccaggcagaggcgctg
accatgtcggaccgcatcgcggtgtttcaccagggaaagatccagcaactgtgcggaccg
cgcgagatgtacgagcagccgtccagtgctttcgtcgccacatttgtcggagagagcaat
cgcctgtcgggcacggtcgaagcgctggtggacggcgtcgccgttctgcgcaccgaaggc
ggctcgctcctgcaggccgttgcaggcgatggcttgcgtgtcggcggcgagggcgtcttc
acgctgcgcccggaacgcgccgagctgtccacgtccaggagcgctgaaggcgtgggcgtg
gccgcgacgctcgaggaggccatcttcgtcggcgacaagatgcgcgcccgtcttcgcacc
agcgacggccaggaaatgatcgcctgccgcagccccgatcagttcgacacgctgcccacg
cccggctcacgcctctgcgtgacatggcgcatcgaacacgcccggatcttcgtcgcaccc
tga
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