Variovorax paradoxus EPS: Varpa_1090
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Entry
Varpa_1090 CDS
T01392
Name
(GenBank) polysaccharide export protein
KO
K01991
polysaccharide biosynthesis/export protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Varpa_1090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_1090
Transporters [BR:
vpe02000
]
Other transporters
Pores ion channels [TC:
1
]
Varpa_1090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLBB_2
Poly_export
SLBB
Wza_C
Motif
Other DBs
NCBI-ProteinID:
ADU35308
UniProt:
E6UVS5
LinkDB
All DBs
Position
1217806..1218960
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AA seq
384 aa
AA seq
DB search
MEINLTRYVYLMGWSAALAGAMLLQGCAPGFGRMAASEPDLGPAPALSADGSPEGALTPI
SPSLIRAMADAQPTAVPADVKALFGEAAPYTIGPGDVVGVIVYDHPELLPNAGAVISQQV
DPTGISVAPGFIVGANGEISFPYIGRVKMQGLTEIEASDLITKRIARYIKEPQVTVRIQS
FRSRRAFVEGEVRSPGLQIFTDVPMTLAEALNRAGGITPNGDRSFVTLTRGDRTTLIDLT
RLQDLGSGAGSIPLQNGDVVLVRNRDENKVVVMGEVLRPSALLMHNGRLSLNEALGEAGS
ASLGTANTGQIYVVRNTAKGTPAVFHLNAKNPAALALADRFPLQPRDVVYIDSVPLVSWN
RVASLILPAAQVLDIGDRVYMNHR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggagatcaatttgacacgctacgtgtacctgatggggtggagcgctgccctggccggc
gcgatgttgctccagggctgtgcgccgggcttcggcaggatggccgcttccgagcccgac
ctcggcccggcgcccgccctgtccgcggacggctcgcccgaaggcgcgctcacgccgatt
tcgccgtcgctcatccgcgcgatggccgatgcgcaaccgaccgcggtgccggccgacgtg
aaggcgctgttcggcgaggccgccccgtacaccatcgggccgggcgatgtcgtgggcgtc
atcgtctacgaccaccccgagctgctcccgaacgccggcgccgtcatttcccagcaggtc
gatccgaccggcatcagcgtggcgccgggcttcatcgtcggcgccaacggggagatcagc
tttccctacatcggccgcgtgaagatgcaggggctcaccgaaatcgaggcctccgacctc
atcaccaagcgcatcgcgcgctacatcaaggagccgcaggtcacggtgcgcatccagtcg
ttccgcagccgccgcgcgttcgtcgaaggcgaggtgcgctcgccggggctgcagatcttc
accgacgtgccgatgacgctggccgaagcgctcaaccgcgccggcggcatcacgcccaac
ggcgaccgctcgttcgtcacgctcacgcgcggcgaccgcaccacgctcatcgacctcacg
cgcctgcaggacctgggcagcggcgccggcagcattccgctgcagaacggcgacgtggtg
ctggtgcgcaaccgcgacgagaacaaggtggtggtgatgggcgaggtgctgcggccttcg
gcgctgctcatgcacaacgggcgcctgagcctgaacgaagcgctcggcgaagccggcagc
gcgagcctgggcaccgcgaacacggggcagatctacgtcgtgcgcaacaccgccaagggc
acgccggccgtgttccacctgaatgcgaagaaccccgccgcgctcgcgctggccgatcgc
tttccgctgcagccgcgcgacgtcgtctacatcgactcggtgccgctcgtgagctggaac
cgcgtggccagcctgatcctgccggccgcccaggtgctggacatcggcgaccgcgtctac
atgaaccaccgatga
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