Variovorax paradoxus EPS: Varpa_1113
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Entry
Varpa_1113 CDS
T01392
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K23508
galactofuranose transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_1113
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_1113
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Galactofuranose transporter
Varpa_1113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
ABC_sub_bind
B12-binding
Peripla_BP_6
Aminotran_5
Glyco_trans_1_4
DUF2325
Motif
Other DBs
NCBI-ProteinID:
ADU35331
UniProt:
E6UWN4
LinkDB
All DBs
Position
1249027..1249992
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AA seq
321 aa
AA seq
DB search
MTMNRRTLNTALAAAALGSMLPVSALAQKKLVLGFAQVGAESEWRTANTESIKSSAKEAG
IELKFSDAQQKQENQIKAIRSYIAQKVDVIAFSPVVESGWETVLREAKAAKIPVVLTDRS
VNTKDDTLYVTFMGSDFVEEGRKAGRWLTEKMKDQKGDVNIVELQGTVGSAPAIDRKKGF
EEIIKADPKFKIIRSQTGDFTRAKGKEVMEAFLKADGKKINVLFAHNDDMAIGAIQAIEE
AGMKPAKDITIISIDGVKGAFEAMIAGKLNVSVECSPLLGPQLMSAVKDIKAGKALPKRI
VTEEGIFPMEVAAKEFPNRKY
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgaatcgccgcaccctcaacaccgcactcgccgctgcagccctgggcagcatg
ctgcccgtgtccgcgctcgcgcagaagaagctcgtgctgggcttcgcacaggtgggcgcc
gagagcgaatggcgcaccgccaacaccgagtcgatcaagtcctcggccaaggaagcgggc
atcgagctcaagttctcggatgcacagcagaagcaggagaaccagatcaaggcgatccgc
tcgtacatcgcgcagaaggtcgacgtgatcgcgttctcgccggtggtcgaatcgggctgg
gaaaccgtgctgcgcgaagccaaggccgccaagatcccggtggtgctgaccgaccgctcg
gtgaacaccaaggacgacacgctctacgtgaccttcatgggttccgacttcgtcgaggaa
ggccgcaaggccggtcgctggctcaccgagaagatgaaggaccagaagggcgacgtgaac
atcgtcgagctgcagggcaccgtgggttccgcgccggccatcgaccgcaagaagggcttc
gaggaaatcatcaaggccgacccgaagttcaagatcatccgctcgcagaccggcgacttc
acccgcgccaagggcaaggaagtgatggaagccttcctcaaggccgacggcaagaagatc
aatgtgctcttcgcgcacaacgacgacatggcgatcggcgcgatccaggccatcgaggaa
gccggcatgaagcccgcgaaggacatcaccatcatctcgatcgacggggtgaagggcgcg
ttcgaagccatgatcgccggcaagctcaacgtgtcggtcgaatgcagcccgctgctcggc
ccgcaactgatgagcgcggtgaaggacatcaaggccggcaaggcgctgcccaagcgcatc
gtgaccgaagaaggcatcttcccgatggaagtggccgccaaggaattcccgaaccgcaag
tactga
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integrated database retrieval system
