Variovorax paradoxus EPS: Varpa_1201 Help Entry Varpa_1201        CDS       T01392                                  Name (GenBank) chaperonin GroEL   KO K04077   chaperonin GroEL [EC:5.6.1.7] Organism vpe  Variovorax paradoxus EPS Pathway vpe03018   RNA degradation Brite KEGG Orthology (KO) [BR:vpe00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     Varpa_1201  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vpe03019]     Varpa_1201    03110 Chaperones and folding catalysts [BR:vpe03110]     Varpa_1201    03029 Mitochondrial biogenesis [BR:vpe03029]     Varpa_1201   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:vpe04147]     Varpa_1201 Enzymes [BR:vpe01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.1  Enzymes altering polypeptide conformation or assembly     5.6.1.7  chaperonin ATPase      Varpa_1201 Messenger RNA biogenesis [BR:vpe03019]  Prokaryotic type   Bacterial mRNA degradation factors    Other RNA degradation factors     Chaperones      Varpa_1201 Chaperones and folding catalysts [BR:vpe03110]  Heat shock proteins   HSP60 / Chaperonin    Varpa_1201 Mitochondrial biogenesis [BR:vpe03029]  Mitochondrial protein import machinery   Matrix    Other matrix factors     Varpa_1201 Exosome [BR:vpe04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    Varpa_1201   Exosomal proteins of other body fluids (saliva and urine)    Varpa_1201   Exosomal proteins of breast cancer cells    Varpa_1201   Exosomal proteins of colorectal cancer cells    Varpa_1201   Exosomal proteins of bladder cancer cells    Varpa_1201 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cpn60_TCP1 Motif Other DBs NCBI-ProteinID:  ADU35419 UniProt:  E6UXY6 LinkDB All DBs Position complement(1351452..1353104) Genome browser AA seq 550 aa AA seqDB search MAAKDVVFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI ELKDKLQNMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGFKLVAAGMNPMDLKRGI DKAVTALVAELKKASKPTTTSKEIAQVGSISANSDETIGKLIADAMDKVGKEGVITVEDG KSLDSELDVVEGMQFDRGYLSPYFINNPEKQSALLDNPFVLLFDKKISNIRDLLPVLEQV AKAGRPLLIIAEEVEGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLEDIAILTGGKV IAEEVGLTLEKVTLADLGQAKRIEVGKENTIIIDGAGAAGDIEARVKQVRVQIEEATSDY DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALL RAKQAVGDSVKGDNADQEAGIKLVLKAIEAPLREIVNNAGGEASVVVNAVLAGTGNYGFN AANDTYGDMLELGILDPTKVTRTALQNAASVSSLLLTTEAMVADAPKDESGAGGGMPDMG GMGGMGGMGM NT seq 1653 nt NT seq  +upstreamnt  +downstreamnt atggcagcaaaagacgtagtcttcggcggagaagcccgcgcacgcatggtcgagggtgtc aacatcctggccaacgcagtcaaagtgaccctgggccccaagggccgcaacgtggtgctc gagcgttcgttcggcgcccccaccgtgaccaaggacggtgtgtccgtggccaaggaaatc gaactcaaggacaagctccagaacatgggcgcccagctcgtgaaggaagtggcttccaag acttcggacaacgccggtgacggcaccaccaccgcgaccgtgctggcccaagccatcgtt cgcgaaggtttcaagctggtggctgccggcatgaacccgatggacctgaagcgcggcatc gacaaggccgtgacggccctggtcgccgagctgaagaaggcttccaagcccaccaccacc tccaaggaaatcgcgcaagtcggctccatctcggccaacagcgacgaaaccatcggcaag ctcatcgctgacgcgatggacaaggtcggcaaggaaggcgtgatcactgtcgaagacggc aagtcgctggacagcgaactcgacgtcgtcgaaggcatgcagttcgaccgcggctacctg tcgccctacttcatcaacaaccccgagaagcaatcggcgctgttggacaaccccttcgtg ctgctgttcgacaagaagatcagcaacatccgtgacctgctgccggtgctggagcaagtc gccaaggctggccgtccgctgctgatcattgccgaagaagtcgaaggcgaagccctggct accttggtcgtgaacacgatccgcggcatcctgaaggtcgtggccgtcaaggcacctggc ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgacgggcggcaaggtc atcgctgaagaagtgggcctgacgctcgaaaaggtgacgctggccgacctgggtcaagcc aagcgcatcgaagtgggcaaggaaaacacgatcatcatcgacggcgccggcgctgctggt gacatcgaagcccgcgtgaagcaagtgcgcgttcagatcgaagaagcgaccagcgactac gaccgtgaaaagctgcaagagcgcgtggccaagctggccggcggcgttgcagtgatcaag gtcggcgctgccaccgaagtcgaaatgaaggaaaagaaggctcgcgtcgaagacgccctg cacgcaacccgcgctgcagtggaagaaggcgttgtggctggcggcggcgtggctctgctg cgtgccaagcaagccgtgggcgactcggtcaagggcgacaacgccgatcaagaagctggc atcaagctggtgctcaaggccatcgaagcgcccctgcgcgaaatcgtgaacaacgccggc ggcgaagcctcggtggtggtgaacgctgtgttggccggcaccggcaactacggcttcaac gctgcgaacgacacgtacggcgacatgctcgagctgggcatcctggacccgacgaaggtc acccgcaccgcactgcagaacgccgcctcggtgtcctcgctgctgctgacgaccgaagcc atggttgctgacgcacccaaggacgagtccggcgccggcggcggcatgcccgacatgggc ggcatgggcggcatgggcggcatgggcatgtaa

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