Variovorax paradoxus EPS: Varpa_1211
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Entry
Varpa_1211 CDS
T01392
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_1211
Transporters [BR:
vpe02000
]
Other transporters
Pores ion channels [TC:
1
]
Varpa_1211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ADU35427
UniProt:
E6UXZ4
LinkDB
All DBs
Position
1362655..1364790
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AA seq
711 aa
AA seq
DB search
MTAAFATTFRLLILGIPFAAHAQQKELPAETAKGQLREVTVSTPRGEVAPFNVPGSVDRI
DGAEMRDSRLQVNLSESLGAVPGLQVQNRLNYAQDLQLSIRGFGARSTFGVRGVRLYVDG
IPATLPDGQGQTSNIDIGSVDRVEVLRGPFSALYGNSSGGVVQAFTASGEGAPRLSYSAA
GGSFGTWRQSMQISGSQSAVDYLLGASRFHTDGWREHSAARRDIANGKLGIALDNGDKLT
LVLNSVRIDAQDPLGLTADQYARAPRSAPLATQYDTRKTVEQTQLGLLYERRIDATQGLR
LMVYGGERKTTQYQSIPPSAQQNPLHAGGVIDLSRQYGGVDVRWTAALQLADRPLDVVAG
LGYDSLRERRRGYENYLGSVANPVLGVQGRLRRSERNEVWNLDPYAQATWRFTERWTLEA
GVRRSSVHFASNDRYIVGANRDDSGTARYSKTLPVASLRYQATPDLALYGSIGRGFETPT
LNELSYRSGGASGLNFALRPSVNDSIEVGAKARLAGGLLTSALFQTRTRDEIVTDTNVGG
RATFQNAGRTRRNGFELGWQHETSNHWRTQLAYTWLDATYRDAFCSPSPCAAANTVAGGN
RIPGIARQSLFASLGWVPPEGWRAGVEMRALGRIQANDVNTASAPGYAVAALYAGYLRKW
ERWEFNAFARVDNLFDRRYVGSVIVNEGNARYYEPAPGRNWTVGLSGAYRF
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgcattcgccaccacctttcgcctgttgatcctgggcattcccttcgccgct
cacgcccagcagaaggagcttccagccgaaacggcgaagggccagttgcgggaggtcacc
gtctccacgccgcgcggagaggtggcacccttcaacgtcccaggctcggtcgaccgcatc
gatggtgcggagatgcgcgacagccgcctgcaggtcaatctctccgaaagcctcggcgcc
gtgccggggctgcaggtgcagaaccggctgaactacgcgcaggacctgcaactgtcgatc
cgcggcttcggcgcgcgctcgaccttcggcgtgcgcggcgtgcggctctacgtcgatggc
attccggccaccttgcccgacgggcaagggcagacgtcgaacatcgacatcggctcggtt
gatcgcgtggaggtgttgcgcgggccgttctcggcgctctatggcaactcatcgggcggc
gtggtgcaagccttcactgcatcgggggaaggcgcgccgcgtctttcctattccgcggcc
ggcggcagcttcggcacctggcggcagtcgatgcagatcagcggctcgcagagcgcggtc
gactacctgctgggcgcgagccgcttccacaccgacggatggcgcgagcacagtgccgcg
cggcgcgacatcgccaacggcaagctgggcattgcgctggacaacggcgacaagctcacg
ctcgtgctcaacagcgtgcgcatcgacgcgcaggatccgctgggcctgaccgccgaccag
tacgcgcgagcgccccgcagcgcgccgctcgcgacgcagtacgacacgcgcaagacggtc
gaacagacgcagctcggtctgctctacgaacggcgcatcgacgcgacgcagggcttgcgt
ctcatggtctacggcggcgagcgcaagacgacgcagtaccagtcgatcccgccctcggcg
cagcagaacccgctgcatgcgggcggcgtgatcgatctctcgcggcagtacggcggcgtc
gatgtgcgctggaccgccgcgctgcaactggccgaccggccgctcgatgtggtggcgggt
ctcggctacgacagcctgcgcgaacgccgccgcggctacgagaactacctcggcagcgtc
gcgaacccggtgctcggcgtgcaggggcgcctgcgccgcagcgagcgcaacgaggtctgg
aacctcgacccctacgcgcaggccacctggcgcttcaccgagcgctggacgctcgaggcc
ggcgtgcgccgcagcagcgtgcacttcgcatcgaacgaccgctacatcgtgggcgcgaac
cgcgacgacagcggcaccgcgcgctacagcaagacgctgccggtggcgtcgctgcgctat
caggcgacgccagacctcgcgctctacggctccatcggccgcgggttcgagacgccgacg
ctcaacgaactctcgtaccgctcgggcggcgcaagcggcctcaacttcgcgctgcggcca
tcggtgaacgacagcatcgaggtgggcgcgaaggcgcggctcgccggcgggctgctgacg
tcggcgctgttccagacgcgcacgcgcgacgagatcgtgaccgacaccaacgtcggcggc
cgcgcgaccttccagaacgcggggcgcacacggcgcaacggcttcgaactcggctggcag
cacgagacgtcgaaccactggcgcacgcagttggcctatacgtggctcgatgcgacgtac
cgcgatgccttctgctcgccgtcgccctgtgcggcagccaacacggtggcgggcggcaac
cgcattccgggcatcgcgcggcagtcgctgttcgcatcgctgggctgggtgccgcccgag
ggttggcgcgccggtgtcgagatgcgcgcgctcgggcgtatccaggcgaacgacgtcaac
accgcgagcgcgccgggctatgccgtcgcggcgctgtatgcgggctatctgaggaaatgg
gagcgttgggagttcaacgccttcgcgcgtgtcgacaacctgttcgaccggcgctacgtg
ggctcggtcatcgtcaacgaaggcaatgcgcgctattacgagcccgcgccgggccgtaac
tggacggtgggcctgagcggtgcgtaccgcttctga
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