Variovorax paradoxus EPS: Varpa_1238
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Entry
Varpa_1238 CDS
T01392
Name
(GenBank) Glutamate synthase (ferredoxin)
KO
K00265
glutamate synthase (NADPH) large chain [EC:
1.4.1.13
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00250
Alanine, aspartate and glutamate metabolism
vpe00910
Nitrogen metabolism
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
vpe01120
Microbial metabolism in diverse environments
vpe01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
Varpa_1238
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Varpa_1238
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vpe01002
]
Varpa_1238
Enzymes [BR:
vpe01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.13 glutamate synthase (NADPH)
Varpa_1238
Peptidases and inhibitors [BR:
vpe01002
]
Cysteine peptidases
Family C44
Varpa_1238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GATase_2
Glu_synthase
Glu_syn_central
GXGXG
Motif
Other DBs
NCBI-ProteinID:
ADU35454
UniProt:
E6UY21
LinkDB
All DBs
Position
1392102..1396856
Genome browser
AA seq
1584 aa
AA seq
DB search
MTTAAEIEHLQKHGLYSGADEHDACGVGFVAHIKGEKSHAIVLQGLKILENLDHRGAVGA
DKLMGDGAGILIQLPDHLYREEMAKQGVTLPPPGEYGVGMIFLPKEHASREACEQEMERA
IKAEGQVLLGWRDVPVNRDMPMSPTVREKEPLLRQVFIGRGNDVIVQDALERKLYVIRKT
ASANIQRLKLKHSKEYYVPSMSSRTVVYKGLLLADQVGTYYLDLQDKRCVSALGLVHQRF
STNTFPEWPLAHPYRYVAHNGEINTVKGNYNWMKAREGVMSSPVLGADLQKLYPISFAGQ
SDTATFDNCLELLTMAGYPISQAVMMMIPEPWEQHATMDPRRRAFYEYHAAMLEPWDGPA
SIVFTDGRQIGATLDRNGLRPSRYCVTDDDLVIMASESGVLPVPEQKIVRKWRLQPGKMF
LIDLEQGRMIDDEEVKATLANSKPYKQWIENLRIKLDSVKAEPVAAPISQVALLDRQQAF
GYTQEDIKFLMSPMAQAGEEGIGSMGNDSPLAVLSNKNKPLYNYFKQLFAQVTNPPIDPI
REAIVMSLVSFIGPKPNLLDINQVNPPMRLEVSQPILDFADMAKLRDIGKYTQGKFKSYV
LDITYPLAWGDEGVEAKLASLCAEAVDAIKGGHNILIVSDRGVSPTQVAIPAVLALSAVH
QYLVREGLRTTAGLVVETGSAREVHHFGVLAGYGAEAVHPYLAMETLAAMHADLPGDLSA
DKAVYNYVKAIGKGLSKIMSKMGVSTYMSYCGAQLFEAIGLNTETVNKYFTGTASRVEGI
GVFEIAEEAIRMHKAAFSDDPVLANMLDAGGEYAWRTRGEEHMWTPDAIAKLQHSTRSNN
WNTYKEYAQLINDQNRRHLTLRGLFEFKIDPAKAIPVDEVEAAADIVKRFATGAMSLGSI
STEAHATLAIAMNRIGGKSNTGEGGEDPARYRNELKGIPIKQGDTLKSVIGAANVEVDLP
LNDGDSLRSRIKQVASGRFGVTAEYLHSADQIQIKMAQGAKPGEGGQLPGGKVTEYIGKQ
RYAVPGVGLISPPPHHDIYSIEDLAQLIHDLKNTAPHASISVKLVSEIGVGTIAAGVAKC
KSDHVVIAGHDGGTGASPWSSIKHAGSPWEIGLAETQQTLVLNRLRSRIRVQADGQMKTG
RDVAIGALLGADEFGFATAPLVVEGCIMMRKCHLNTCPVGVATQDPILRKKFSGKPEHVV
NYFFFVAEEVRQIMAQLGIRKFDDLIGRADLLDTRKGIEHWKASGLDFSRLFALPNVPAD
VARFHVENQDHGLDKALDVKLIEKSRPAIDKGEKVQFIEVARNVNRSVGAMLSGALTKVH
PQGLPDDSIRIQLEGTGGQSFGAFLARGITLYLIGDANDYTGKGLSGGRVVVRPSLDFRG
EAVRNTIVGNTALYGATTGEAYLCGVAGERFAVRLSGATAVIEGTGDHGCEYMTGGTVAV
LGKTGRNFAAGMSGGVAFVYDEDGQFATRCNLSMVSLDKVLTSAEQTASVHRKIWHGGET
DEAQLKKLLEEHHRWTGSKRARELLDNWAVSRTKFVKVFPNEYKRALAELHDRKVELTSS
GNNAHVGLEPHALAPASQSAPAAV
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggctgccgagatcgaacatctccaaaaacacggtctgtattccggtgccgat
gagcacgatgcctgtggcgtcggcttcgtggcccatatcaagggcgaaaagagccacgcc
attgttctgcagggcttgaagatcctcgagaacctcgaccatcgcggcgcagtgggcgct
gacaagctaatgggcgacggcgccggcatcctgatccagctgcccgatcacctctaccgc
gaggagatggccaagcagggcgtcacgctgcccccgccgggcgaatacggcgtcggcatg
atcttcctgccgaaggaacacgcctcccgcgaagcctgcgagcaagagatggaacgcgcc
atcaaggccgaaggccaggtgctgctgggctggcgcgacgtgccggtcaaccgcgacatg
cccatgtcgcccaccgtgcgcgaaaaggagccgctgctgcgccaggtcttcatcggccgc
ggcaacgacgtgatcgtgcaggacgcgctggaacgcaagctctacgtgatccgcaagacc
gccagcgccaacatccagcgcctgaagctcaagcacagcaaggaatactacgttccgagc
atgtccagccgcaccgtggtctacaagggcctgctgctggccgatcaggtcggtacctac
tacctggacctgcaggacaagcgctgcgtctcggccctgggcctggtgcaccagcgcttc
tcgaccaacaccttccccgagtggccgctggcccacccgtaccgctatgtcgcgcacaac
ggcgaaatcaacacggtcaagggcaactacaactggatgaaggcgcgcgaaggcgtgatg
tcgtcgcccgtgctgggcgccgacctgcagaagctctacccgatcagcttcgccggccag
tccgacaccgccaccttcgacaactgcctcgagctcttgacgatggccggctaccccatc
agccaggccgtgatgatgatgattcccgagccttgggagcagcacgccaccatggacccg
cgtcgccgcgcgttctatgaataccacgccgccatgctcgagccgtgggacggccccgcc
tccatcgtgttcaccgacggccgccagatcggcgccacgctcgaccgcaacggcctgcgt
ccgtcgcgctactgcgtgaccgacgacgacctggtcatcatggcttcggagtcgggcgtg
ctgcccgtgcccgagcagaagatcgtgcgcaagtggcgcctgcagcccggcaagatgttc
ctgatcgacctggagcagggccgcatgatcgacgacgaggaggtcaaggccacccttgcg
aacagcaagccctacaagcagtggatcgagaacctgcgcatcaagctggacagcgtcaag
gccgagccggtcgcggcgccgatcagccaggttgcattgctcgatcgccagcaagccttc
ggctacacccaggaagacatcaagttcctgatgagcccgatggcgcaggccggcgaagag
ggcatcggctccatgggcaacgacagcccgctggccgtgctctccaacaagaacaagccg
ctctacaactacttcaagcagttgttcgcgcaggtgacgaacccgccgatcgacccgatc
cgcgaagcgatcgtgatgtcgctggtgtccttcatcggcccgaagcccaacctgctggac
atcaaccaggtcaacccgccgatgcggctcgaagtgagccagccgatcctggacttcgcc
gacatggcgaagctgcgcgacatcggcaagtacacgcagggcaagttcaagagctacgtg
ctcgacatcacctacccgctcgcctggggcgacgaaggcgtcgaagccaagctggcgtcg
ctgtgcgccgaagcggtggacgcgatcaagggcggccacaacatcctgatcgtgagcgac
cgcggcgtgagcccgacgcaggtggcgattccggcggtgctggctctctcggccgtgcac
cagtacttggtccgtgaaggcctgcgcaccacggccggcctcgtcgtcgaaaccggttcg
gcccgcgaagtgcatcacttcggcgtgctcgccggctacggcgcggaagccgtgcacccg
tacctcgcgatggaaacgctggcggccatgcacgccgacctgcccggcgacctgagcgcc
gacaaggcggtctacaactacgtcaaggccatcggcaagggcctgtcgaagatcatgtcg
aagatgggtgtcagcacctacatgagctactgcggcgcgcagttgttcgaagccatcggc
ctgaacaccgagacggtgaacaagtacttcaccggcacggccagccgcgtggaaggcatc
ggcgtcttcgagatcgccgaggaagccatccgcatgcacaaggccgcgttcagcgacgac
ccggtgctcgccaacatgctggatgccggcggcgaatacgcctggcgcacgcgcggcgaa
gagcacatgtggacgcccgacgccatcgccaagctgcagcacagcacgcgctccaacaac
tggaacacgtacaaggaatacgcgcagctcatcaacgaccagaaccgccggcacctcacg
ctgcgcgggctgttcgagttcaagatcgatccggccaaggcgattccggtggacgaggtc
gaagcggccgcggacatcgtcaagcgtttcgccaccggcgcgatgtcgctcggctcgatc
agcaccgaggcgcacgccacgctggccattgccatgaaccgcatcggcggcaagagcaac
acgggcgagggcggcgaagatccggcgcgctaccgcaacgagctcaagggcatcccgatc
aagcagggcgacacgctcaagagcgtgatcggcgcggccaacgtcgaggtcgacctgccg
ctcaacgatggcgactcgctgcgttcgcgcatcaagcaggtcgcgtcgggccgcttcggc
gtcaccgcggagtacctgcactcggccgaccagatccagatcaagatggcgcagggtgcc
aagccgggcgagggcggtcagctcccgggcggcaaggtcaccgagtacatcggcaagcag
cgttatgccgtcccgggcgtgggcctcatctcgccgccgccgcaccacgacatctactcg
atcgaagacctggctcagctcatccacgacctgaagaacaccgcgccgcacgcgagcatc
agcgtgaagctggtgagcgaaatcggcgtcggcaccatcgccgcgggcgtggccaagtgc
aagagcgaccacgtcgtgatcgccggccatgacggcggcacgggcgcctcgccctggtcg
tcgatcaagcatgcgggcagcccgtgggaaatcggcctggccgagacgcagcagacgctg
gtgctcaaccgcctgcgcagccgcatccgcgtgcaggccgacggccagatgaagaccggc
cgcgacgtcgccatcggcgcactgctgggcgccgacgagttcggcttcgccaccgcgccg
ctggtggtcgagggctgcatcatgatgcgcaagtgccacctgaacacctgcccggtgggc
gtggccacgcaggacccgatcctgcgcaagaagttctcgggcaagcccgagcacgtcgtc
aactacttcttcttcgttgcggaagaagtgcgccagatcatggcccagctgggcatccgc
aaattcgacgacctgatcggccgcgccgacctgctggacacccgcaagggcatcgaacac
tggaaggcttcgggcctggacttcagccgcctgttcgcgctgccgaacgtgccggccgac
gtggcgcgcttccacgtcgagaaccaggaccacggcctggacaaggcgctggacgtgaag
ctcatcgagaagtcgcgccccgccatcgacaagggcgagaaggtgcagttcatcgaggtg
gcgcgaaacgtcaaccgctcggtgggcgcgatgctttcgggcgcgctgaccaaggtgcat
ccgcagggcctgcccgacgattcgatccgcatccagctcgaaggcacgggcggtcagtcg
ttcggtgcgttcctcgcgcgcggcatcacgctgtacctgatcggcgatgccaacgactac
accggcaagggcctctcgggcggccgcgtggtggtgcgtccgagcctggacttccgcggc
gaggcggtgcgcaacacgatcgtcggcaacaccgcgctgtacggcgcgacgaccggcgag
gcgtatctctgcggcgtggccggcgagcgtttcgcggtgcgcctctcgggtgccacggcg
gtcatcgaaggcacgggcgaccacggttgcgaatacatgaccggcggcacggtcgcggtg
ctcggcaagaccggccgcaacttcgcggcaggcatgagcggcggtgtcgcgttcgtctac
gacgaggacggccagttcgccacgcgctgcaatctctcgatggtgtcgctcgacaaggtg
ctgacctccgccgagcagaccgccagcgtgcatcgcaagatctggcacggcggcgagacc
gacgaagcgcaactgaagaagctgctcgaagaacaccaccgctggaccggcagcaagcgc
gcgcgcgagctgctggacaactgggccgtgtcgcgcaccaagttcgtcaaggtgtttccg
aacgaatacaagcgggcgctcgccgaactgcacgaccgcaaggtcgagttgaccagcagc
ggcaacaacgcgcacgtggggctggagccgcacgcgctggctcccgcatcgcaatcggct
ccggccgcagtttga
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