Variovorax paradoxus EPS: Varpa_1271
Help
Entry
Varpa_1271 CDS
T01392
Name
(GenBank) HtrA2 peptidase
KO
K04772
serine protease DegQ [EC:3.4.21.-]
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vpe01002
]
Varpa_1271
Peptidases and inhibitors [BR:
vpe01002
]
Serine peptidases
Family S1: chymotrypsin family
Varpa_1271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
Trypsin
PDZ_2
PDZ
PDZ_6
PDZ_1
Peptidase_S46
Motif
Other DBs
NCBI-ProteinID:
ADU35487
UniProt:
E6UZ70
LinkDB
All DBs
Position
complement(1421764..1422924)
Genome browser
AA seq
386 aa
AA seq
DB search
MKRTWLLFAQAVTVLLAAYFVVATLKPEWINKRSTSLGGVVSIVEAPAGAPSVPAVGSLS
AAAKKASPAVVSINTSKAAQRHPRSNDPWFRFFFGDQADQPQVGLGSGVIVSTDGYILTN
NHVVEGADEIEVTLNDSRHARGKVIGTDPDTDLAVLKIELDKLPVIVLGNSDELLVGDQV
LAIGNPFGVGQTVTSGIVSALGRNQLGINNFENFIQTDAAINPGNSGGALIDVNGNLQGI
NTAIYSRSGGSMGIGFAIPVSMAKIVLEGIVKEGQVRRGWIGVEPNDLSPELAETFGVKA
DAGVIITGVLQNGPAAKAGIRPGDVITSVGEKKTDNVQALLTAVAGLKPGDTARFALQRG
SDKMELDVTPGLRPKSPVRQVPNQQE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcacctggctgctctttgcccaagccgtgaccgtcctgctggcggcctatttc
gtcgtcgcaacgctcaagcccgagtggatcaacaagcgctcgacctcgctcggcggcgtg
gtgtcgatcgtcgaggcgccggccggcgccccgagcgtgcccgccgtcggcagcctgagc
gctgccgccaagaaggcctcgccggcggtggtgagcatcaacacaagcaaggcggcgcag
cgccatccgcgcagcaacgacccctggttccgcttcttcttcggcgaccaggccgaccag
ccccaggtgggcctgggcagcggcgtgatcgtgagcaccgacggctacatcctcaccaac
aaccacgtggtcgagggcgccgacgaaatcgaagtgaccctgaacgacagccgccacgct
cgcggcaaggtgatcggcaccgatcccgacaccgacctggcggtgctcaagatcgagctc
gacaagctcccggtgatcgttctgggcaactccgacgagctgctggtgggcgaccaggtg
ctggccatcggcaaccccttcggcgtgggccagacggtgacgagcggcatcgtctcggcg
ctcggccgcaaccagttgggcatcaacaacttcgagaacttcatccagaccgatgcggcc
atcaaccccggcaactcgggcggcgcgctgatcgacgtcaacggcaacctgcagggcatc
aacaccgcgatctactcgcgctcgggtggcagcatgggcatcggcttcgccattccggtg
tcgatggccaagatcgtgctggaaggcatcgtcaaggaaggccaggtgcgccgcggctgg
atcggcgtggagccgaacgacctctcgcccgaactggccgagaccttcggcgtgaaggcc
gatgcgggtgtgatcatcaccggcgtgctgcagaacggtcccgctgccaaggcaggtatc
cggccgggcgacgtgatcacctcggtgggcgagaagaagaccgacaacgtgcaggccctg
ctgaccgccgtcgcgggcctcaagcccggcgacaccgcgcgctttgcgctgcagcgcggc
agcgacaagatggaactggatgtgacgccggggctccggccgaagagcccggtccggcaa
gtgccgaatcaacaagagtaa
DBGET
integrated database retrieval system
